documentation/_toc.yml at main · imqcam/documentation · GitHub

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# Table of contents
# Learn more at https://jupyterbook.org/customize/toc.html

format: jb-book
root: docs/intro.md

parts:
- caption: The IMQCAM Data Portal
  chapters:
  - file: docs/users_guide/overview
  - file: docs/users_guide/tutorial
  - file: docs/users_guide/sign_in
  - file: docs/users_guide/manage
  - file: docs/users_guide/access
  - file: docs/users_guide/metadata
  - file: docs/users_guide/analysis
  - file: docs/users_guide/dataflows
  - file: docs/users_guide/forms
    sections:
    - file: docs/users_guide/upload_forms
  - file: docs/users_guide/sample_tracker
- caption: "Clusters: Defining the IMQCAM Digital Twin Workflow/ Pipeline"
  chapters:
  - file: docs/Clusters/cluster1/e1intro
  - file: docs/Clusters/cluster1/porosity_model
#   - file: docs/enclaves/enclave2/e2intro
#   - file: docs/enclaves/enclave3/e3intro
# - caption: Administrator's Guide
#   chapters:
#   - file: docs/admin/overview
#   - file: docs/admin/install
- caption: Architecture
  chapters:
  - file: docs/infrastructure/overview
  - file: docs/infrastructure/gemd
  - file: docs/infrastructure/openmsi
  - file: docs/infrastructure/girder
  - file: docs/infrastructure/wholetale
  - file: docs/infrastructure/github
# - caption: Project Overview
#   chapters:
#   - file: docs/overview
#   - file: docs/seedlings
#     sections:
#     - file: docs/seedlings/jhu/jhu
#     - file: docs/seedlings/tamu/tamu
#     - file: docs/seedlings/northwestern/northwestern
#     - file: docs/case-studies
#   - file: docs/examples
#   - file: docs/references