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Integrator.h and StitchedER.h: move #endif to end of file so the class definition is actually inside the include guard.
Integrator::stitch_up: sort chromosome keys before iterating so output
order is deterministic across runs and platforms.
Parser::extract_inputs: when fastder is built without libBigWig, a .bw
input is now a hard error rather than a silent empty sample that would
bias mean coverage.
Averager::compute_mean_coverage: pre-build a vector of pointers to each
chromosome's sample list so worker threads read by index, avoiding
non-const operator[] access on a shared map.
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