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setup.py
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import setuptools
setuptools.setup(
author="Lee Kamentsky",
author_email="leek@broadinstitute.org",
classifiers=[
"Development Status :: 5 - Production/Stable",
"License :: OSI Approved :: GNU General Public License v2 (GPLv2)",
"Programming Language :: Python :: 2",
"Programming Language :: Python :: 3",
"Programming Language :: Java",
"Topic :: Scientific/Engineering :: Bio-Informatics",
"Topic :: Multimedia :: Graphics :: Graphics Conversion"
],
description="Read and write life sciences file formats",
extras_require={
"test": [
"pytest"
]
},
install_requires=[
"boto3",
"future"
],
license="GPL License",
long_description="""Python-bioformats is a Python wrapper for Bio-Formats, a standalone Java library for reading
and writing life sciences image file formats. Bio-Formats is capable of parsing both pixels and metadata for a
large number of formats, as well as writing to several formats. Python-bioformats uses the python-javabridge to
start a Java virtual machine from Python and interact with it. Python-bioformats was developed for and is used by
the cell image analysis software CellProfiler (cellprofiler.org).""",
name="python-bioformats",
package_data={
"bioformats": [
"jars/*.jar"
]
},
packages=[
"bioformats"
],
url="http://github.com/CellProfiler/python-bioformats/",
setup_requires = ['setuptools_scm'],
use_scm_version = {
"write_to": "bioformats/_version.py",
},
)