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model.py
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import tensorflow as tf
from utils import *
from keras import backend as K
import numpy as np
import pandas as pd
import argparse
from keras.models import Sequential, Model
from keras import activations
from keras.engine.topology import Layer, InputSpec
from keras.utils import conv_utils
from keras.layers import LSTM, InputLayer, Dense, Input, Flatten, concatenate, Reshape
from keras.callbacks import EarlyStopping
from sklearn.preprocessing import MinMaxScaler
from sklearn.metrics import mean_squared_error
from keras.optimizers import Adam
from keras import metrics
from keras.layers.normalization import BatchNormalization
from random import randint
import pickle
batch_size = 64
mean_label = 0.0
label_max = 0
label_min = 0
max_epoch = 200
num_feature = 100
seq_len = 8
hidden_dim = 512
threshold = 10.0
maxtruey = 0
mintruey = 0
eps = 1e-5
loss_lambda = 10.0
feature_len = 0
local_image_size = 9
cnn_hidden_dim_first = 32
len_valid_id = 0
toponet_len = 32
sess = tf.Session()
K.set_session(sess)
class Local_Seq_Conv(Layer):
def __init__(self, output_dim, seq_len, feature_size, kernel_size, activation=None,
kernel_initializer='glorot_uniform',
bias_initializer='zeros', padding='same', strides=(1, 1), **kwargs):
super(Local_Seq_Conv, self).__init__(**kwargs)
self.output_dim = output_dim
self.seq_len = seq_len
self.bias_initializer = bias_initializer
self.kernel_size = kernel_size
self.kernel_initializer = kernel_initializer
self.padding = padding
self.strides = strides
self.activation = activations.get(activation)
def build(self, input_shape):
batch_size = input_shape[0]
self.kernel = []
self.bias = []
for eachlen in range(self.seq_len):
self.kernel += [self.add_weight(shape=self.kernel_size,
initializer=self.kernel_initializer,
trainable=True, name='kernel_{0}'.format(eachlen))]
self.bias += [self.add_weight(shape=(self.kernel_size[-1],),
initializer=self.bias_initializer,
trainable=True, name='bias_{0}'.format(eachlen))]
self.build = True
def call(self, inputs):
output = []
for eachlen in range(self.seq_len):
tmp = K.bias_add(K.conv2d(inputs[:, eachlen, :, :, :], self.kernel[eachlen],
strides=self.strides, padding=self.padding), self.bias[eachlen])
if self.activation is not None:
output += [self.activation(tmp)]
output = tf.stack(output, axis=1)
return output
def compute_output_shape(self, input_shape):
return (input_shape[0], input_shape[1], input_shape[2], input_shape[3], self.output_dim)
def build_model(trainX, trainY, testX, testY, trainimage, testimage, traintopo, testtopo, feature_len):
# X_train, Y_train, X_test, Y_test = Featureset_get()
image_input = Input(shape=(seq_len, local_image_size,
local_image_size, None), name='cnn_input')
spatial = Local_Seq_Conv(output_dim=cnn_hidden_dim_first, seq_len=seq_len, feature_size=feature_len,
kernel_size=(3, 3, 1, cnn_hidden_dim_first), activation='relu',
kernel_initializer='glorot_uniform', bias_initializer='zeros', padding='same',
strides=(1, 1))(image_input)
spatial = BatchNormalization()(spatial)
# spatial = Local_Seq_Pooling(seq_len=seq_len)(spatial)
spatial = Local_Seq_Conv(output_dim=cnn_hidden_dim_first, seq_len=seq_len, feature_size=feature_len,
kernel_size=(3, 3, cnn_hidden_dim_first, cnn_hidden_dim_first), activation='relu',
kernel_initializer='glorot_uniform', bias_initializer='zeros', padding='same',
strides=(1, 1))(spatial)
spatial = BatchNormalization()(spatial)
# spatial = Local_Seq_Pooling(seq_len=seq_len)(spatial)
spatial = Local_Seq_Conv(output_dim=cnn_hidden_dim_first, seq_len=seq_len, feature_size=feature_len,
kernel_size=(3, 3, cnn_hidden_dim_first, cnn_hidden_dim_first), activation='relu',
kernel_initializer='glorot_uniform', bias_initializer='zeros', padding='same',
strides=(1, 1))(spatial)
# spatial = Local_Seq_Pooling(seq_len=seq_len)(spatial)
# spatial = BatchNormalization()(spatial)
# spatial = Local_Seq_Conv(output_dim=cnn_hidden_dim_first, seq_len=seq_len, feature_size=feature_len, kernel_size=(3, 3, cnn_hidden_dim_first, cnn_hidden_dim_first), activation='relu', kernel_initializer='glorot_uniform', bias_initializer='zeros', padding='same', strides=(1, 1))(spatial)
# spatial = BatchNormalization()(spatial)
# spatial = Local_Seq_Pooling(seq_len=seq_len)(spatial)
# spatial = Local_Seq_Conv(output_dim=cnn_hidden_dim_first, seq_len=seq_len, feature_size=feature_len, kernel_size=(3, 3, cnn_hidden_dim_first, cnn_hidden_dim_first), activation='relu', kernel_initializer='glorot_uniform', bias_initializer='zeros', padding='same', strides=(1, 1))(spatial)
spatial = Flatten()(spatial)
spatial = Reshape(target_shape=(seq_len, -1))(spatial)
spatial_out = Dense(units=64, activation='relu')(spatial)
lstm_input = Input(shape=(seq_len, feature_len),
dtype='float32', name='lstm_input')
x = concatenate([lstm_input, spatial_out], axis=-1)
# lstm_out = Dense(units=128, activation=relu)(x)
lstm_out = LSTM(units=hidden_dim, return_sequences=False, dropout=0)(x)
topo_input = Input(shape=(toponet_len,), dtype='float32', name='topo_input')
topo_emb = Dense(units=6, activation='tanh')(topo_input)
static_dynamic_concate = concatenate([lstm_out, topo_emb], axis=-1)
res = Dense(units=1, activation='sigmoid')(static_dynamic_concate)
model = Model(inputs=[image_input, lstm_input, topo_input],
outputs=res)
sgd = Adam(lr=0.001, beta_1=0.9, beta_2=0.999, epsilon=1e-08, decay=1e-6)
model.compile(loss=mean_absolute_percentage_error_revise, optimizer=sgd,
metrics=[metrics.mae])
earlyStopping = EarlyStopping(
monitor='val_loss', patience=10, verbose=0, mode='min')
model.fit([trainimage, trainX, traintopo], trainY, batch_size=batch_size, epochs=max_epoch, validation_split=0.1,
callbacks=[earlyStopping])
# model.save('local_conv_lstm_total_embed.h5')
return model