_output.yml

bookdown::gitbook:
  css: style.css
  includes:
    in_header: google_analytics.html
  config:
    toc:
      collapse: section
      before: |
        <li><a href="index.html">Table of Contents</a></li>
      after: |
        <li><a href="http://www.sanger.ac.uk/science/groups/hemberg-group" target="blank">Hemberg Lab, 2016</a></li>
    download: [pdf]
    edit:
      link: https://github.com/hemberg-lab/scRNA.seq.course/edit/master/%s
      text: "Edit"
    search: true
bookdown::tufte_html_book:
  css: [style.css, toc.css]
bookdown::pdf_book:
  includes:
    in_header: preamble.tex
  latex_engine: xelatex
  citation_package: natbib
bookdown::html_book:
  css: [style.css, toc.css]
bookdown::epub_book:
  stylesheet: style.css