Wrong syntax in test example

[gputzel]

The example run in the Wiki does not appear to have the right syntax.

To test FragGeneScanPlus with a complete genomic sequence,
./FGS+ -genome=./example/NC_000913.fna -out=./example/NC_000913.test -complete=1 -train=complete

If I'm not mistaken, these are not the right command line options for the FGS+ executable (they would work on the Perl script that comes with FragGeneScan).

[ariahahn]

It should be:

USAGE: ./FragGeneScan.pl -s [seq_file_name] -o [output_file_name] -w [1 or 0] -t [train_file_name] (-p [thread_num])

Updating the wiki now! Thanks