From 410c06ad50fde936b65edc4d087b192150b52eac Mon Sep 17 00:00:00 2001 From: Emilio Righi Date: Sat, 16 May 2026 09:59:20 +0200 Subject: [PATCH] test --- test_project/annotations.tsv | 8 ++++++++ test_project/manifest.yaml | 9 +++++++++ 2 files changed, 17 insertions(+) create mode 100644 test_project/annotations.tsv create mode 100644 test_project/manifest.yaml diff --git a/test_project/annotations.tsv b/test_project/annotations.tsv new file mode 100644 index 0000000..784bd7a --- /dev/null +++ b/test_project/annotations.tsv @@ -0,0 +1,8 @@ +assembly_accession access_url +GCA_048338725.1 https://ftp.ebi.ac.uk/pub/ensemblorganisms/Sus_scrofa/GCA_048338725.1/ensembl/geneset/2025_08/genes.gff3.gz +GCA_044906185.1 https://ftp.ebi.ac.uk/pub/ensemblorganisms/Sus_scrofa/GCA_044906185.1/ensembl/geneset/2025_08/genes.gff3.gz +NOT_A_VALID_ACCESSION https://ftp.ebi.ac.uk/pub/ensemblorganisms/Sus_scrofa/GCA_048338725.1/ensembl/geneset/2025_08/genes.gff3.gz +GCA_963930625.1 https://example.invalid/nonexistent.gff3.gz +GCA_048338725.1 https://ftp.ebi.ac.uk/pub/ensemblorganisms/Sus_scrofa/GCA_046128825.1/ensembl/geneset/2025_08/genes.gff3.gz +GCA_040869115.1 https://ftp.ebi.ac.uk/pub/ensemblorganisms/Sus_scrofa/GCA_044906185.1/ensembl/geneset/2025_08/genes.gff3.gz +GCA_000820885.1 https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/820/885/GCA_000820885.1_KLDO_01/GCA_000820885.1_KLDO_01_genomic.gff.gz diff --git a/test_project/manifest.yaml b/test_project/manifest.yaml new file mode 100644 index 0000000..e9b50ae --- /dev/null +++ b/test_project/manifest.yaml @@ -0,0 +1,9 @@ +# Copy this folder to / and replace values before opening a PR. +provider_name: "Example Lab" +pipeline_method: "Braker3 + manual curation" +pipeline_version: "1.2.0" +project_display_name: "Example community annotations" +description: "Illustrative manifest for the registry layout (not a real dataset)." +# contact_email: "pi@example.org" +# license: "CC-BY-4.0" +# homepage_url: "https://example.org/project"