From 3bd1f59c8afead538f6d26979810712515299509 Mon Sep 17 00:00:00 2001
From: Artur-man <artur-man@hotmail.com>
Date: Tue, 26 May 2026 20:20:57 +0200
Subject: [PATCH 1/2] replace utils::data with BiocGenerics::data

---
 NAMESPACE | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/NAMESPACE b/NAMESPACE
index 42a8a48..4d11a3e 100644
--- a/NAMESPACE
+++ b/NAMESPACE
@@ -144,6 +144,7 @@ importFrom(BiocGenerics,sort)
 importFrom(BiocGenerics,start)
 importFrom(BiocGenerics,strand)
 importFrom(BiocGenerics,width)
+importFrom(BiocGenerics,data)
 importFrom(BiocParallel,MulticoreParam)
 importFrom(BiocParallel,SnowParam)
 importFrom(BiocParallel,bplapply)
@@ -202,4 +203,3 @@ importFrom(parallel,stopCluster)
 importFrom(stats,as.dist)
 importFrom(stats,optim)
 importFrom(stats,setNames)
-importFrom(utils,data)

From 39769397e94a52b131e35b9a06361ef60723ccfc Mon Sep 17 00:00:00 2001
From: Artur-man <artur-man@hotmail.com>
Date: Tue, 26 May 2026 21:25:52 +0200
Subject: [PATCH 2/2] update roxygen2 doc

---
 NAMESPACE          | 2 +-
 R/aminoacid_dist.R | 2 +-
 2 files changed, 2 insertions(+), 2 deletions(-)

diff --git a/NAMESPACE b/NAMESPACE
index 4d11a3e..8bfb7a5 100644
--- a/NAMESPACE
+++ b/NAMESPACE
@@ -139,12 +139,12 @@ import(foreach)
 importFrom(BiocGenerics,"end<-")
 importFrom(BiocGenerics,"start<-")
 importFrom(BiocGenerics,"strand<-")
+importFrom(BiocGenerics,data)
 importFrom(BiocGenerics,end)
 importFrom(BiocGenerics,sort)
 importFrom(BiocGenerics,start)
 importFrom(BiocGenerics,strand)
 importFrom(BiocGenerics,width)
-importFrom(BiocGenerics,data)
 importFrom(BiocParallel,MulticoreParam)
 importFrom(BiocParallel,SnowParam)
 importFrom(BiocParallel,bplapply)
diff --git a/R/aminoacid_dist.R b/R/aminoacid_dist.R
index 46cabcd..61ca016 100644
--- a/R/aminoacid_dist.R
+++ b/R/aminoacid_dist.R
@@ -57,7 +57,7 @@
 #' @param ... Not in use yet.
 #' @return A numerical vector with the pairwise distances between codons in 
 #' sequences 'x' and 'y'.
-#' @importFrom utils data
+#' @importFrom BiocGenerics data
 #' @export
 #' @seealso \code{\link{automorphisms}} and \code{\link{codon_coord}}
 #' @references