Python CI

Various small refactors #761

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Run time

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Job	Run time
Lint & Type Check	4m 11s
Batch Evaluation Tests	5m 42s
Core Tests (Python 3.10)	4m 8s
Core Tests (Python 3.12)	9m 4s
Core Tests (Python 3.11)	4m 32s
MCP End-to-End Tests	45s
Upload Coverage	8s
	28m 30s