Python CI

Run precommit and fix type errors (#145) #619

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Run time

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Job	Run time
Lint & Type Check	56s
Core Tests (Python 3.12)	3m 50s
MCP End-to-End Tests	45s
Core Tests (Python 3.10)	3m 49s
Core Tests (Python 3.11)	3m 49s
Batch Evaluation Tests	1m 8s
Upload Coverage	6s
	14m 23s