From 87dae6627de2575a23f2cb9187d28c38e6b4af3d Mon Sep 17 00:00:00 2001 From: Aliakasndr Dziarkach <18146690+AliaksandrDziarkach@users.noreply.github.com> Date: Fri, 20 Feb 2026 20:41:46 +0300 Subject: [PATCH] Update indigo to 1.39.0 --- rst/download/bingo.rst | 3 +- rst/download/bingo/bingo-1.39.0.rst | 49 ++++++++++++ rst/download/indigo.rst | 3 +- rst/download/indigo/indigo-1.39.0.rst | 98 +++++++++++++++++++++++ rst/indigo/release-notes/index.rst | 1 + rst/indigo/release-notes/indigo-1.39.0.md | 24 ++++++ rst/newsfeed.rst | 25 ++++++ 7 files changed, 201 insertions(+), 2 deletions(-) create mode 100644 rst/download/bingo/bingo-1.39.0.rst create mode 100644 rst/download/indigo/indigo-1.39.0.rst create mode 100644 rst/indigo/release-notes/indigo-1.39.0.md diff --git a/rst/download/bingo.rst b/rst/download/bingo.rst index dfa0033..8908d69 100644 --- a/rst/download/bingo.rst +++ b/rst/download/bingo.rst @@ -15,7 +15,7 @@ Latest release .. toctree:: :maxdepth: 1 - bingo/bingo-1.38.0.rst + bingo/bingo-1.39.0.rst Older releases @@ -24,6 +24,7 @@ Older releases .. toctree:: :maxdepth: 1 + bingo/bingo-1.38.0.rst bingo/bingo-1.37.0.rst bingo/bingo-1.36.0.rst bingo/bingo-1.35.0.rst diff --git a/rst/download/bingo/bingo-1.39.0.rst b/rst/download/bingo/bingo-1.39.0.rst new file mode 100644 index 0000000..50f03bb --- /dev/null +++ b/rst/download/bingo/bingo-1.39.0.rst @@ -0,0 +1,49 @@ +Bingo 1.39.0 +------------ + +The changelog is available `on this page <../../indigo/release-notes/indigo-1.39.0.html>`__ + +.. list-table:: + :header-rows: 1 + :stub-columns: 1 + :widths: 28 24 24 24 + + * - + - |image0| Linux + - |image1| Windows + - |image2| Mac OS + * - Oracle + - `64-bit `__ + - `64-bit `__ + - binaries upon request. + * - PostgreSQL 17 + - `64-bit `__ + - \- + - `64-bit `__ + * - PostgreSQL 16 + - `64-bit `__ + - `64-bit `__ + - `64-bit `__ + * - PostgreSQL 15 + - `64-bit `__ + - `64-bit `__ + - `64-bit `__ + * - PostgreSQL 14 + - `64-bit `__ + - `64-bit `__ + - `64-bit `__ + * - PostgreSQL 13 + - `64-bit `__ + - `64-bit `__ + - `64-bit `__ + * - Microsoft SQL Server + - \- + - `64-bit `__ + - \- + +`Source code on GitHub `__ + + +.. |image0| image:: ../../assets/Linux.png +.. |image1| image:: ../../assets/Windows.png +.. |image2| image:: ../../assets/AppleSZ.png diff --git a/rst/download/indigo.rst b/rst/download/indigo.rst index b5d99cf..d7f87f9 100644 --- a/rst/download/indigo.rst +++ b/rst/download/indigo.rst @@ -15,7 +15,7 @@ Latest release .. toctree:: :maxdepth: 1 - indigo/indigo-1.38.0.rst + indigo/indigo-1.39.0.rst Older releases -------------- @@ -23,6 +23,7 @@ Older releases .. toctree:: :maxdepth: 1 + indigo/indigo-1.38.0.rst indigo/indigo-1.37.0.rst indigo/indigo-1.36.0.rst indigo/indigo-1.35.0.rst diff --git a/rst/download/indigo/indigo-1.39.0.rst b/rst/download/indigo/indigo-1.39.0.rst new file mode 100644 index 0000000..b105d2b --- /dev/null +++ b/rst/download/indigo/indigo-1.39.0.rst @@ -0,0 +1,98 @@ + +.. toctree:: + :hidden: + :includehidden: + + ../../indigo/release-notes/index.rst + + +Indigo 1.39.0 +------------- + +Language Bindings +~~~~~~~~~~~~~~~~~ + +.. list-table:: + :header-rows: 0 + :stub-columns: 1 + + * - |p-icon| Python + - `indigo-python.zip `__ + * - |j-icon| Java + - `indigo-java.zip `__ + * - |c-icon| .NET + - `indigo-dotnet.zip `__ + * - |n-icon| Native Libraries in one archive + - `indigo-native-shared-libs.zip `__ + + +Platform/CPU Bindings +~~~~~~~~~~~~~~~~~~~~~ + +.. list-table:: + :header-rows: 1 + :stub-columns: 1 + + * - + - |image0| Linux + - |image1| Windows + - |image2| Mac OS + * - |n-icon| Native Libraries x64 + - `indigo-libs-linux-x86_64.zip `__ + - `indigo-libs-windows-x86_64.zip `__ + - `indigo-libs-macos-x86_64.zip `__ + * - + - + - `indigo-libs-windows-mingw-x86_64.zip `__ + - + * - |n-icon| Native Libraries ARM64 + - `indigo-libs-linux-aarch64.zip `__ + - \- + - `indigo-libs-macos-aarch64.zip `__ + * - |n-icon| Native Libraries i386 + - \- + - `indigo-libs-windows-i386.zip `__ + - \- + * - |n-icon| Utilities x64 + - `indigo-utils-linux-x86_64.zip `__ + - `indigo-utils-windows-x86_64.zip `__ + - `indigo-utils-macos-x86_64.zip `__ + +Source code +~~~~~~~~~~~ + +`Source code zip `__ + +`Repository on GitHub `__ + + +NuGet Repository +~~~~~~~~~~~~~~~~ + +Indigo .NET packages available at `Nuget `__ + +Just add ``Indigo.Net`` as a dependency into the project. + +PyPi package +~~~~~~~~~~~~ + +Indigo Python SDK can be found at `PyPi `__ + +One can install the Indigo library using *pip* utility + + +.. code-block:: xml + + pip install epam.indigo + + + +.. |image0| image:: ../../assets/Linux.png +.. |image1| image:: ../../assets/Windows.png +.. |image2| image:: ../../assets/AppleSZ.png +.. |image3| image:: ../../assets/globe.png +.. |p-icon| image:: ../../assets/indigo/python-icon.png +.. |j-icon| image:: ../../assets/indigo/java-icon.png +.. |c-icon| image:: ../../assets/indigo/csharp-icon.png +.. |n-icon| image:: ../../assets/indigo/native-icon.png +.. |w-icon| image:: ../../assets/indigo/wasm-icon.png diff --git a/rst/indigo/release-notes/index.rst b/rst/indigo/release-notes/index.rst index 5130a28..c261d26 100644 --- a/rst/indigo/release-notes/index.rst +++ b/rst/indigo/release-notes/index.rst @@ -7,6 +7,7 @@ Contents: .. toctree:: :maxdepth: 2 + indigo-1.39.0 indigo-1.38.0 indigo-1.37.0 indigo-1.36.0 diff --git a/rst/indigo/release-notes/indigo-1.39.0.md b/rst/indigo/release-notes/indigo-1.39.0.md new file mode 100644 index 0000000..ec0acec --- /dev/null +++ b/rst/indigo/release-notes/indigo-1.39.0.md @@ -0,0 +1,24 @@ +# Indigo 1.39.0 +Released 2026-02-20 + +## Features +* [3211](https://github.com/epam/Indigo/issues/3211) Introducing alignment of sense and antisense chains +* [3273](https://github.com/epam/Indigo/issues/3273) Circular structures improvement - formation of fused rings +* [3250](https://github.com/epam/Indigo/issues/3250) Alignment of sense and antisense strings in AxoLabs format +* [3337](https://github.com/epam/Indigo/issues/3337) Bingo NoSQL tautomer substructure search support. + +## Bugfixes and improvements +* [3282](https://github.com/epam/Indigo/issues/3282) Can't use indigo as a git submodule +* [3297](https://github.com/epam/Indigo/issues/3297) Random '$$$$V2.0' empty return from conversion to HELM +* [3306](https://github.com/epam/Indigo/issues/3306) Saving to HELM doesn't work for cycled structures consist of nucleosides +* [3177](https://github.com/epam/Indigo/issues/3177) System can't calculate Calculate properties window values for Amino acids with query bonds +* [3299](https://github.com/epam/Indigo/issues/3299) System should set Implicit H value for atoms if the comes without hydrogens from CDXML +* [3343](https://github.com/epam/Indigo/issues/3343) Export to Mol v3000 works wrong for stereo bonds between monomers +* [3369](https://github.com/epam/Indigo/issues/3369) Bingo NoSQL treat empty flags as NONE instead of ALL +* [3363](https://github.com/epam/Indigo/issues/3363) The layout algorithm returns different coordinates on macOS for some tests +* [3342](https://github.com/epam/Indigo/issues/3342) Export ot SVG and PNG doesn't work for stereo bond between monomers, system throws an error: pool: access to unused element +* [3343](https://github.com/epam/Indigo/issues/3343) Export to Mol v3000 works wrong for stereo bonds between monomers +* [3344](https://github.com/epam/Indigo/issues/3344) Export to SVG/PNG works wrong for stereo bonds between monomers + + +**Full Changelog**: https://github.com/epam/Indigo/compare/indigo-1.38.0-rc.1...indigo-1.39.0 \ No newline at end of file diff --git a/rst/newsfeed.rst b/rst/newsfeed.rst index 5831f71..fe259a9 100644 --- a/rst/newsfeed.rst +++ b/rst/newsfeed.rst @@ -7,6 +7,31 @@ News newsfeed release-notes/index +Indigo and Bingo 1.39.0 released +-------------------------------- + +*20 February 2026* + +We are happy to announce that a new version 1.39.0 of Indigo toolkit and Bingo is released. + +* |indigo_1_39_0_notes| + +* |indigo_1_39_0_downloads| + +* |bingo_1_39_0_downloads| + +.. |indigo_1_39_0_notes| raw:: html + + Release Notes + +.. |indigo_1_39_0_downloads| raw:: html + + Indigo Downloads + +.. |bingo_1_39_0_downloads| raw:: html + + Bingo Downloads + Indigo and Bingo 1.38.0 released --------------------------------