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image_train.py
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113 lines (97 loc) · 3.71 KB
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"""
Train a diffusion model on images.
"""
import argparse
from guided_diffusion import logger
from guided_diffusion.image_datasets import load_data, IQTDataset
from guided_diffusion.resample import create_named_schedule_sampler
from guided_diffusion.script_util import (
model_and_diffusion_defaults,
create_model_and_diffusion,
args_to_dict,
add_dict_to_argparser,
)
from guided_diffusion.train_util import TrainLoop
from torch.utils.data import Dataset, DataLoader
import yaml
import glob
import torch
device = torch.device("cuda" if torch.cuda.is_available() else "cpu")
def load_data_custom(data_loader):
while True:
yield from data_loader
def main():
with open('/cluster/project0/IQT_Nigeria/skim/diffusion_inverse/guided-diffusion/configs.yaml') as file:
configs = yaml.load(file, Loader=yaml.FullLoader)
args = create_argparser().parse_args()
# dist_util.setup_dist()
logger.configure(dir="./logs_large_zero2two_HCPMoreSlice2025")
logger.log("creating model and diffusion...")
model, diffusion = create_model_and_diffusion(configs = configs,
**args_to_dict(args, model_and_diffusion_defaults().keys())
)
if configs['fine_tune']:
model.load_state_dict(
torch.load("./logs_large_zero2two/model120000.pt", map_location="cpu")
)
model = model.to(device)
schedule_sampler = create_named_schedule_sampler(args.schedule_sampler, diffusion)
logger.log("creating data loader...")
# data = load_data(
# data_dir=args.data_dir,
# batch_size=args.batch_size,
# image_size=args.image_size,
# class_cond=args.class_cond,
# )
files = glob.glob(args.data_dir[0] + '/T1w/T1w_acpc_dc_restore_brain.nii.gz')#T1w_acpc_dc_restore_brain_sim036T_4x_groundtruth.nii.gz')
print("File being used: ", args.data_dir[0])
if len(args.data_dir[0]) > 1:
for i in range(len(args.data_dir)):
if 'skim' in args.data_dir[i]:
files_new = glob.glob(args.data_dir[i] + '/gt.npy')
else:
files_new = glob.glob(args.data_dir[i] + '/T1w/T1w_acpc_dc_restore_brain.nii.gz')
dataset = IQTDataset(files, configs = configs)
print(f"Files: {len(files)} Dataset size: {len(dataset)}")
data = DataLoader(dataset, batch_size=args.batch_size, shuffle=True, num_workers=1, drop_last=False)
data = load_data_custom(data)
logger.log("training...")
TrainLoop(
model=model,
diffusion=diffusion,
data=data,
batch_size=args.batch_size,
microbatch=args.microbatch,
lr=args.lr,
ema_rate=args.ema_rate,
log_interval=args.log_interval,
save_interval=args.save_interval,
resume_checkpoint=args.resume_checkpoint,
use_fp16=args.use_fp16,
fp16_scale_growth=args.fp16_scale_growth,
schedule_sampler=schedule_sampler,
weight_decay=args.weight_decay,
lr_anneal_steps=args.lr_anneal_steps,
).run_loop()
def create_argparser():
defaults = dict(
data_dir=["/cluster/project0/IQT_Nigeria/HCP_t1t2_ALL/sim/[!9]*/"],#"/cluster/project0/IQT_Nigeria/skim/HCP_Harry_x4/train/",
schedule_sampler="uniform",
lr=1e-4,
weight_decay=0.0,
lr_anneal_steps=0,
batch_size=8,
microbatch=-1, # -1 disables microbatches
ema_rate="0.9999", # comma-separated list of EMA values
log_interval=10,
save_interval=10000,
resume_checkpoint="",
use_fp16=False,
fp16_scale_growth=1e-3,
)
defaults.update(model_and_diffusion_defaults())
parser = argparse.ArgumentParser()
add_dict_to_argparser(parser, defaults)
return parser
if __name__ == "__main__":
main()