ChangeLog

2026-04-20 Luca Sartore <drwolf85@gmail.com>
    * The HRTnomaly package VERSION 26.04.20 has been created
    * Syncronized the content of the folder `src/mimalloc/` with its most
      recent version available on GitHub
    * Updated `DESCRIPTION` file with current information
    * Updated `README.md` file with current GitHub version
    * Updated `inst/INSTALL.md` file with current GitHub version

2026-02-24 Luca Sartore <drwolf85@gmail.com>
    * The HRTnomaly package VERSION 26.02.24 has been created
    * Update the example in the `README.md` file

2026-02-22 Luca Sartore <drwolf85@gmail.com>
    * The HRTnomaly package VERSION 26.02.22 has been created
    * The field `SystemRequirements` in `DESCRIPTION` is now requiring a
      compiler supporting the C11 standard
    * The source code of the library `mimalloc` and its `LICENSE` file have
      been included in the `src` folder
    * All `src\*.c` files using `malloc`, `calloc`, and `free` functions
      have been edited to use the respective `mi_malloc`, `mi_calloc`,
      and `mi_free` functions

2025-12-22 Luca Sartore <drwolf85@gmail.com>
    * The HRTnomaly package VERSION 25.12.22 has been created.
    * The new functions `wscroring_tails()`, `wtail_check()`, `wcellwise()`
      and `wbayeswise()` are now implemented in `src\cellwise.c`
    * The functions `init_param()` and `relat_check()` are updated for 
      weighted regression in `src\cellwise.c`
    * The `cellwise()` function in `R\cellwise.R` was update for weighted
      calculations
    * The `bayeswise()` function in `R\bayeswise.R` was update for weighted
      calculations
    * The documentation of the `cellwise()` function in `man\cellwise.Rd`
      was update accordingly
    * The documentation of the `bayeswise()` function in `man\bayeswise.Rd`
      was update accordingly
    * The `dif()` function in `R\dif.R` is now made to handle missing values
    * The `gif()` function in `R\gif.R` is now made to handle missing values
    * Corrected typos in `R\pif.R`

2025-12-04 Luca Sartore <drwolf85@gmail.com>
    * The HRTnomaly package VERSION 25.12.04 has been created
    * Enforced storage mode of data-derived matrices in `R\cellwise.R`
    * Enforced storage mode of data-derived matrices in `R\bayeswise.R`
    * Add a badge in `README.md` with GitHub version 

2025-12-01 Luca Sartore <drwolf85@gmail.com>
    * The HRTnomaly package VERSION 25.12.01 has been created
    * Modified the lion algorithm by setting an adaptive learning rate
      in `src\cellwise.c`

2025-11-24 Luca Sartore <drwolf85@gmail.com>
    * The HRTnomaly package VERSION 25.11.24 has been created
    * Updated `src/cellwise.c` to account for a more robust self-regression 
    * Removed `\dontrun{}` from the documentation in `man\class_check.Rd`
    * Removed `\dontrun{}` from the documentation in `man\dif.Rd`
    * Removed `\dontrun{}` from the documentation in `man\fuzzyHRT.Rd`
    * Removed `\dontrun{}` from the documentation in `man\gif.Rd`
    * Removed `\dontrun{}` from the documentation in `man\pif.Rd`
    * Removed `\dontrun{}` from the documentation in `man\print.checkwise.Rd`
    * Removed `\dontrun{}` from the roxygen2 documentation in `R\class_check.R`
    * Removed `\dontrun{}` from the roxygen2 documentation in `R\dif.R`
    * Removed `\dontrun{}` from the roxygen2 documentation in `R\fuzzyHRT.R`
    * Removed `\dontrun{}` from the roxygen2 documentation in `R\gif.R`
    * Removed `\dontrun{}` from the roxygen2 documentation in `R\pif.R`
    * Removed `\dontrun{}` from the roxygen2 documentation in `R\print.checkwise.R`

2025-11-22 Luca Sartore <drwolf85@gmail.com>
    * The HRTnomaly package VERSION 25.11.22 has been created
    * Included roxygen2 documentation to the file `R/bayesHRT.R`
    * Included roxygen2 documentation to the file `R/bayeswise.R`
    * Included roxygen2 documentation to the file `R/bootHRT.R`
    * Included roxygen2 documentation to the file `R/cellwise.R`
    * Included roxygen2 documentation to the file `R/class_check.R`
    * Included roxygen2 documentation to the file `R/dif.R`
    * Included roxygen2 documentation to the file `R/fuzzyHRT.R`
    * Included roxygen2 documentation to the file `R/gif.R`
    * Included roxygen2 documentation to the file `R/pif.R`
    * Included roxygen2 documentation to the file `R/print.checkwise.R`
    * Included roxygen2 documentation to the file `R/setCores.R` 
    * Updated the file `man/bayesHRT.R` using roxygen2 
    * Updated the file `man/bayeswise.R` using roxygen2
    * Updated the file `man/bootHRT.R` using roxygen2
    * Updated the file `man/cellwise.R` using roxygen2
    * Updated the file `man/class_check.R` using roxygen2
    * Updated the file `man/dif.R` using roxygen2
    * Updated the file `man/fuzzyHRT.R` using roxygen2
    * Updated the file `man/gif.R` using roxygen2
    * Updated the file `man/pif.R` using roxygen2
    * Updated the file `man/print.checkwise.R` using roxygen2
    * Updated the file `man/setCores.R` using roxygen2
    * Mentioned bug reporters into the `THANKS` file

2025-11-20 Luca Sartore <drwolf85@gmail.com>
    * The HRTnomaly package VERSION 25.11.20 has been created
    * Edited `\usage` lines in `man/pif.Rd` up to 90 characters

2025-11-19 Luca Sartore <drwolf85@gmail.com>
    * The HRTnomaly package VERSION 25.11.19 has been created
    * Added `inline` to several functions in `src/cellwise.c`
    * Updated matrix initializations in `R/cellwise.R`
    * Updated matrix initializations in `R/bayeswise.R`
    * Fixed a typo in `R/zzz.R`

2025-11-18 Luca Sartore <drwolf85@gmail.com>
    * The HRTnomaly package VERSION 25.11.18 has been created
    * Debugged the `mat_val_grad`, and `init_param` functions in `src/cellwise.c`
    * Updated the example code in the file "man/class_check.Rd"
    * Update all files in `src/` to avoid double-freeing memory.

2025-11-17 Luca Sartore <drwolf85@gmail.com>
    * The HRTnomaly package VERSION 25.11.17 has been created
    * Debugged the `cmp_dbl`, `median_wna`, `init_param`, `mat_val_grad`,
    `lion`, and `relat_check` functions in `src/cellwise.c`

2025-09-09 Luca Sartore <drwolf85@gmail.com>
    * The HRTnomaly package VERSION 25.9.9 has been created
    * Included "R/pif.R" for R code implementing proximity isolation forests
    * Included "src/pif.c" for C code implementing proximity isolation forests
    * Included "man/pif.Rd" for documenting proximity isolation forests

2025-06-04 Luca Sartore <drwolf85@gmail.com>
    * The HRTnomaly package VERSION 25.6.4 has been created
    * Included "awesome" badge in `README.md`

2025-02-25 Luca Sartore <drwolf85@gmail.com>
    * The HRTnomaly package VERSION 25.2.25 has been created
    * Udpate version numbers in `DESCRIPTION` and `inst/INSTALL.md` files
    * Debugged the `median`, `group_normalize`, and `group_tail` functions
      in `src/fuzzyHRT.c` to fix clang undefined behaviour
    * Udpate markdown code for images in  `README.md`
    * Modified precompiler code around the `bayeswise` function 
      in `src/cellwise.c` to fix standalone C tests
    * Fixed example code in `man/bayesHRT.Rd`
    * Fixed example code in `man/bootHRT.Rd`
    * Fixed example code in `man/cellwise.Rd`
    * Fixed example code in `man/class_check.Rd`
    * Fixed example code in `man/fuzzyHRT.Rd`
    * Fixed example code in `man/dif.Rd`
    * Fixed example code in `man/fuzzyHRT.Rd`
    * Fixed example code in `man/gif.Rd`
    * Fixed example code in `man/HRTnomaly-package.Rd`
    * Fixed example code in `man/print.checkwise.Rd`
    * Fixed example code in `man/toy.Rd`

2025-02-18 Luca Sartore <drwolf85@gmail.com>
    * The HRTnomaly package VERSION 25.2.18 has been created for upload to CRAN

2025-01-22 Luca Sartore <drwolf85@gmail.com>
    * The HRTnomaly package VERSION 25.1.22 has been created
    * Created a `src/myomp.h` file to debug a clang issue with OpenMP
    * Debugged OpenMP code in `src/HRTnomaly.c`
    * Debugged OpenMP code in `src/fuzzyHRT.c`
    * Debugged OpenMP code in `src/bayes_hppc.c`
    * Debugged OpenMP code in `src/post_thresh.c`
    * Debugged OpenMP code in `src/cellwise.c`
    * Debugged OpenMP code in `src/dif.c`
    * Debugged OpenMP code in `src/gif.c`
    * Modified startup messages in `R/zzz.R`

2025-01-18 Luca Sartore <drwolf85@gmail.com>
    * The HRTnomaly package VERSION 25.1.18 has been created
    * Fixed the `Author` and `Authors@R` fields in the `DESCRIPTION` file

2025-01-11 Luca Sartore <drwolf85@gmail.com>
    * The HRTnomaly package VERSION 25.1.11 has been created