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SPARKS - Software for Polymerization and Reaction Kinetics Simulations

SPaRKS is a highly-modular framework for deterministic and stochastic simulations of polymerization and general reaction kinetics. It provides a unified interface to define and compare models and simulators, and parameter estimation. Written in Python.

PyPI DOI Python

Quick install

The easiest way to install SPaRKS is via pip:

pip3 install pysparks

We recommend setting a python virtual environment before installing the package.

python3 -m venv .venv
source .venv/bin/activate

Examples

There are jupyter notebooks in the docs/notebooks directory. More relevant examples can be found at the supporting data for the manuscript below. This can be found at this repository: DOI

How to Cite

Citeable DOI for this version of SPaRKS: DOI

If you use SPaRKS in your project, please cite