From edd3968abb0710f6a51ef7672cb8a04e2783b406 Mon Sep 17 00:00:00 2001 From: "njzjz-bot[bot]" <48687836+njzjz-bot@users.noreply.github.com> Date: Sun, 21 Dec 2025 16:28:39 +0000 Subject: [PATCH] docs: update DeepModeling domain to deepmodeling.com Update the DeepModeling domain from deepmodeling.org to deepmodeling.com. The former is no longer used. Generated by the task: https://github.com/njzjz-bot/njzjz-bot/issues/23. --- source/Tutorials/DP-GEN/index.rst | 2 +- source/Tutorials/DeePMD-kit/index.rst | 2 +- source/Tutorials/DeePMD-kit/learnDoc/Installation.md | 8 ++++---- source/Tutorials/DeePMD-kit/learnDoc/run5minutes.md | 2 +- 4 files changed, 7 insertions(+), 7 deletions(-) diff --git a/source/Tutorials/DP-GEN/index.rst b/source/Tutorials/DP-GEN/index.rst index 0151bc1..67b19fc 100644 --- a/source/Tutorials/DP-GEN/index.rst +++ b/source/Tutorials/DP-GEN/index.rst @@ -2,7 +2,7 @@ Using DP-GEN ================== -This tutorial tell you how to use DP-GEN，for detail information, you can check `DP-GEN Doc `_ +This tutorial tell you how to use DP-GEN，for detail information, you can check `DP-GEN Doc `_ .. toctree:: diff --git a/source/Tutorials/DeePMD-kit/index.rst b/source/Tutorials/DeePMD-kit/index.rst index f4b336b..853d1b1 100644 --- a/source/Tutorials/DeePMD-kit/index.rst +++ b/source/Tutorials/DeePMD-kit/index.rst @@ -3,7 +3,7 @@ Using DeePMD-Kit ======================== -This tutorial tell you how to use DeePMD-kit，for detail information, you can check `DeePMD-kit Doc `_ +This tutorial tell you how to use DeePMD-kit，for detail information, you can check `DeePMD-kit Doc `_ .. toctree:: diff --git a/source/Tutorials/DeePMD-kit/learnDoc/Installation.md b/source/Tutorials/DeePMD-kit/learnDoc/Installation.md index 6938989..55e0e2a 100644 --- a/source/Tutorials/DeePMD-kit/learnDoc/Installation.md +++ b/source/Tutorials/DeePMD-kit/learnDoc/Installation.md @@ -33,20 +33,20 @@ Users can use `conda` to install the DeePMD-kit if their machine can be connecte Both the CPU and GPU versions of DeePMD-kit can be installed via conda. Users can create an environment that contains the CPU version of DeePMD-kit and LAMMPS. ```sh -(base)$ conda create -n deepmd deepmd-kit=*=*cpu libdeepmd=*=*cpu lammps -c https://conda.deepmodeling.org +(base)$ conda create -n deepmd deepmd-kit=*=*cpu libdeepmd=*=*cpu lammps -c https://conda.deepmodeling.com ``` or create an environment that contains the GPU version of DeePMD-kit and LAMMPS. ```sh -(base)$ conda create -n deepmd deepmd-kit=*=*gpu libdeepmd=*=*gpu lammps cudatoolkit=11.3 horovod -c https://conda.deepmodeling.org +(base)$ conda create -n deepmd deepmd-kit=*=*gpu libdeepmd=*=*gpu lammps cudatoolkit=11.3 horovod -c https://conda.deepmodeling.com ``` The environment also contains the [CUDA Toolkit](https://docs.nvidia.com/deploy/cuda-compatibility/index.html#binary-compatibility__table-toolkit-driver). Users could change the CUDA Toolkit version from 10.1 or 11.3. The latest version of DeePMD-kit will be installed by the above command. Users may want to specify the DeePMD-kit version such as 2.0.0 using ```sh -(base)$ conda create -n deepmd deepmd-kit=2.0.0=*cpu libdeepmd=2.0.0=*cpu lammps horovod -c https://conda.deepmodeling.org +(base)$ conda create -n deepmd deepmd-kit=2.0.0=*cpu libdeepmd=2.0.0=*cpu lammps horovod -c https://conda.deepmodeling.com ``` Before using the DeePMD-kit, users need to ensure that the environment is active. Users can enable the deepmd environment using @@ -100,4 +100,4 @@ DeePMD-kit: A deep learning package for many-body potential energy representatio ... ``` -Note that users can also install the DeePMD-kit software from the source code, but this process is relatively complex. A detailed description is presented in ['Install from source code'](https://docs.deepmodeling.org/projects/deepmd/en/master/install/install-from-source.html) Section of DeePMD-kit’s documentation. +Note that users can also install the DeePMD-kit software from the source code, but this process is relatively complex. A detailed description is presented in ['Install from source code'](https://docs.deepmodeling.com/projects/deepmd/en/master/install/install-from-source.html) Section of DeePMD-kit’s documentation. diff --git a/source/Tutorials/DeePMD-kit/learnDoc/run5minutes.md b/source/Tutorials/DeePMD-kit/learnDoc/run5minutes.md index df1e7d2..94e2b4a 100644 --- a/source/Tutorials/DeePMD-kit/learnDoc/run5minutes.md +++ b/source/Tutorials/DeePMD-kit/learnDoc/run5minutes.md @@ -55,7 +55,7 @@ In this example, we converted the computational results of the VASP in the `OUTC Suppose you have an "OUTCAR" for molecular dynamics, which contains 1000 frames.`set_size=200` means these 1000 points will be divided into 5 subsets, which is named as `data/set.000`\~`data/set.004`, respectively. The size of each set is 200. In these 5 sets, `data/set.000`\~`data/set.003` will be considered as the training set by the DeePMD-kit, and `data/set.004` will be considered as the test set. The last set will be considered as the test set by the DeePMD-kit by default. If there is only one set, the set will be both the training set and the test set. (Of course, such test set is meaningless.) -"OUTCAR" we provided only contains 1 frame, so in "data" directory(in the same directory with "OUTCAR") there is only 1 set: `data/set.000`. Some procudure needs to be done if you want to use these data. Detailed method using dpdata can be found in [next chapter](https://tutorials.deepmodeling.org/en/latest/Tutorials/DeePMD-kit/learnDoc/Handson-Tutorial%28v2.0.3%29.html). +"OUTCAR" we provided only contains 1 frame, so in "data" directory(in the same directory with "OUTCAR") there is only 1 set: `data/set.000`. Some procudure needs to be done if you want to use these data. Detailed method using dpdata can be found in [next chapter](https://tutorials.deepmodeling.com/en/latest/Tutorials/DeePMD-kit/learnDoc/Handson-Tutorial%28v2.0.3%29.html). Now we just skip these details and use the data we prepared for you. The data is in the root directory of our Tutorial data. ```