Models for testing

[pr4deepr]

Do you have a specifc set of models that I can test specifically?

Originally posted by @carlosuc3m in #59

Models from here: https://zenodo.org/records/15314214

• 2D_enteric_neuron.bioimage.io.model
• 2D_enteric_neuron_subtype.bioimage.io.model
• 2D_Ganglia_RGB_v3.bioimage.io.model

Cheers
Pradeep

[carlosuc3m]

Thanks @pr4deepr I will add them to the testing pool. Are they released in the bioimage.io repo?
In addition, does ht eplugin work well now?

[pr4deepr]

I had trouble uploading the model on the new bioimageio upload:

Details
RemoteError: Traceback (most recent call last): ^^^^^^^^^^^^^^^^^^ File "/usr/local/lib/python3.11/site-packages/httpx/_client.py", line 1859, in post return await self.request( ^^^^^^^^^^^^^^^^^^^ File "/usr/local/lib/python3.11/site-packages/httpx/_client.py", line 1527, in request request = self.build_request( ^^^^^^^^^^^^^^^^^^^ File "/usr/local/lib/python3.11/site-packages/httpx/_client.py", line 378, in build_request return Request( ^^^^^^^^ File "/usr/local/lib/python3.11/site-packages/httpx/_models.py", line 408, in init headers, stream = encode_request( ^^^^^^^^^^^^^^^ File "/usr/local/lib/python3.11/site-packages/httpx/_content.py", line 216, in encode_request return encode_json(json) ^^^^^^^^^^^^^^^^^ File "/usr/local/lib/python3.11/site-packages/httpx/_content.py", line 177, in encode_json body = json_dumps( ^^^^^^^^^^^ File "/usr/local/lib/python3.11/json/init.py", line 238, in dumps **kw).encode(obj) ^^^^^^^^^^^ File "/usr/local/lib/python3.11/json/encoder.py", line 200, in encode chunks = self.iterencode(o, _one_shot=True) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/local/lib/python3.11/json/encoder.py", line 258, in iterencode return _iterencode(o, 0) ^^^^^^^^^^^^^^^^^ ValueError: Out of range float values are not JSON compliant

During handling of the above exception, another exception occurred:

Traceback (most recent call last): File "/usr/local/lib/python3.11/site-packages/hypha_rpc/rpc.py", line 1341, in _wait result = await result ^^^^^^^^^^^^ File "/app/bioengine_worker/apps_manager.py", line 978, in create_deployment_function return await self._ray_serve_post_request( ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/app/bioengine_worker/apps_manager.py", line 940, in _ray_serve_post_request raise RuntimeError( RuntimeError: Failed to call 'validate' on deployment 'bioimage_io_model_runner': Out of range float values are not JSON compliant Exception: Traceback (most recent call last): ^^^^^^^^^^^^^^^^^^ File "/usr/local/lib/python3.11/site-packages/httpx/_client.py", line 1859, in post return await self.request( ^^^^^^^^^^^^^^^^^^^ File "/usr/local/lib/python3.11/site-packages/httpx/_client.py", line 1527, in request request = self.build_request( ^^^^^^^^^^^^^^^^^^^ File "/usr/local/lib/python3.11/site-packages/httpx/_client.py", line 378, in build_request return Request( ^^^^^^^^ File "/usr/local/lib/python3.11/site-packages/httpx/_models.py", line 408, in init headers, stream = encode_request( ^^^^^^^^^^^^^^^ File "/usr/local/lib/python3.11/site-packages/httpx/_content.py", line 216, in encode_request return encode_json(json) ^^^^^^^^^^^^^^^^^ File "/usr/local/lib/python3.11/site-packages/httpx/_content.py", line 177, in encode_json body = json_dumps( ^^^^^^^^^^^ File "/usr/local/lib/python3.11/json/init.py", line 238, in dumps **kw).encode(obj) ^^^^^^^^^^^ File "/usr/local/lib/python3.11/json/encoder.py", line 200, in encode chunks = self.iterencode(o, _one_shot=True) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/local/lib/python3.11/json/encoder.py", line 258, in iterencode return _iterencode(o, 0) ^^^^^^^^^^^^^^^^^ ValueError: Out of range float values are not JSON compliant

During handling of the above exception, another exception occurred:

Traceback (most recent call last): File "/usr/local/lib/python3.11/site-packages/hypha_rpc/rpc.py", line 1341, in _wait result = await result ^^^^^^^^^^^^ File "/app/bioengine_worker/apps_manager.py", line 978, in create_deployment_function return await self._ray_serve_post_request( ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/app/bioengine_worker/apps_manager.py", line 940, in _ray_serve_post_request raise RuntimeError( RuntimeError: Failed to call 'validate' on deployment 'bioimage_io_model_runner': Out of range float values are not JSON compliant

[pr4deepr]

yes, plugin seems to work now, except for this bug: #64