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symap.config
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31 lines (27 loc) · 1.32 KB
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# SyMAP configuration file
#
# Note, rows preceded by # are ignored.
# db_name: the MySQL database name (symapDemo is the suggested name for creating the demo)
# db_server: typically localhost
# db_adminuser and db_adminpasswd: r/w access, build the database
# db_clientuser and db_clientpasswd: optional read-only access, view the database
# See https://csoderlund.github.io/SyMAP/SystemGuide.html#mysql for details.
db_name = symapDemo
db_server = localhost
db_adminuser =
db_adminpasswd =
db_clientuser =
db_clientpasswd =
######################
# Uncomment the line and set the number of CPUs (threads, processors) to be used for computation.
# This setting will be used every time symap is started.
#nCPUs =
# If the suppled mummer3 does not work for you, follow instructions in ext/mummer4/README
# Then uncomment the line and provide the full path to mummer4/m4,
# e.g. /Users/cari/Workspace/symap_5/ext/mummer4/m4
#mummer_path =
# If you are using a machine other than lintel64 (linux), mac (macOS intel) or macM4 (MacOS M4),
# you may compile the executables and put them in new subdirectories.
# Uncomment the line and provide the directory name for the /ext executables for MUMmer, MAFFT and MUSCLE
# e.g. symap_5/ext/mummer/xxx would be 'arch = xxx'.
#arch =