To the best of my ability to tell, the MAP and GENOTYPE files don't have notation for insertions or deletions. For deletions, it would be nice to have cells in the visualization that render differently than the gray -- cells which indicate missing data. For insertions, I'm not sure what to do. Possible have an extra column in the visualization that would act like a hyperlink: if you click the column, it opens up with the inserted bases visualized.
This would add a level of complexity to the MAP and GENOTYPE files that is perhaps unwanted. But insertions and deletions are certainly a reality of sequence data...
Thanks!
To the best of my ability to tell, the MAP and GENOTYPE files don't have notation for insertions or deletions. For deletions, it would be nice to have cells in the visualization that render differently than the gray -- cells which indicate missing data. For insertions, I'm not sure what to do. Possible have an extra column in the visualization that would act like a hyperlink: if you click the column, it opens up with the inserted bases visualized.
This would add a level of complexity to the MAP and GENOTYPE files that is perhaps unwanted. But insertions and deletions are certainly a reality of sequence data...
Thanks!