Describe the bug
I am getting an error trying to download the scFlow package using devtools.
To Reproduce
I run the following code in R and get this error:
> devtools::install_github("combiz/scFlow")
Downloading GitHub repo combiz/scFlow@HEAD
Error: Failed to install 'scFlow' from GitHub:
Line starting 'Roxyg ...' is malformed!
System
- Hardware: HPC
- OS: Linux
- Version of scFlow: 0.7.1
- R sessionInfo():
R version 4.1.1 (2021-08-10)
Platform: x86_64-conda-linux-gnu (64-bit)
Running under: Red Hat Enterprise Linux
Matrix products: default
BLAS/LAPACK: /ahg/regevdata/projects/ICA_Lung/Oscar/conda/conda_env/lib/libopenblasp-r0.3.18.so
locale:
[1] C
attached base packages:
[1] stats graphics grDevices utils datasets methods base
loaded via a namespace (and not attached):
[1] ps_1.7.0 prettyunits_1.1.1 rprojroot_2.0.3 crayon_1.5.1
[5] withr_2.5.0 brio_1.1.3 R6_2.5.1 lifecycle_1.0.1
[9] magrittr_2.0.3 rlang_1.0.2 cachem_1.0.6 cli_3.3.0
[13] curl_4.3.2 remotes_2.4.2 fs_1.5.2 testthat_3.1.4
[17] callr_3.7.0 ellipsis_0.3.2 desc_1.4.1 devtools_2.4.3
[21] tools_4.1.1 glue_1.6.2 purrr_0.3.4 pkgload_1.2.4
[25] fastmap_1.1.0 compiler_4.1.1 processx_3.6.0 pkgbuild_1.3.1
[29] sessioninfo_1.2.2 memoise_2.0.1 usethis_2.1.6
Other information
I am able to download the 'combiz/scFlowData' package using devtools with no errors.
Describe the bug
I am getting an error trying to download the scFlow package using devtools.
To Reproduce
I run the following code in R and get this error:
System
R version 4.1.1 (2021-08-10)
Platform: x86_64-conda-linux-gnu (64-bit)
Running under: Red Hat Enterprise Linux
Matrix products: default
BLAS/LAPACK: /ahg/regevdata/projects/ICA_Lung/Oscar/conda/conda_env/lib/libopenblasp-r0.3.18.so
locale:
[1] C
attached base packages:
[1] stats graphics grDevices utils datasets methods base
loaded via a namespace (and not attached):
[1] ps_1.7.0 prettyunits_1.1.1 rprojroot_2.0.3 crayon_1.5.1
[5] withr_2.5.0 brio_1.1.3 R6_2.5.1 lifecycle_1.0.1
[9] magrittr_2.0.3 rlang_1.0.2 cachem_1.0.6 cli_3.3.0
[13] curl_4.3.2 remotes_2.4.2 fs_1.5.2 testthat_3.1.4
[17] callr_3.7.0 ellipsis_0.3.2 desc_1.4.1 devtools_2.4.3
[21] tools_4.1.1 glue_1.6.2 purrr_0.3.4 pkgload_1.2.4
[25] fastmap_1.1.0 compiler_4.1.1 processx_3.6.0 pkgbuild_1.3.1
[29] sessioninfo_1.2.2 memoise_2.0.1 usethis_2.1.6
Other information
I am able to download the 'combiz/scFlowData' package using devtools with no errors.