DGEobj.plots/NAMESPACE at main · cb4ds/DGEobj.plots · GitHub

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# Generated by roxygen2: do not edit by hand

export(MDS_var_explained)
export(QCplots)
export(cdfPlot)
export(checkSex)
export(comparePlot)
export(comparePrep)
export(ggplotMDS)
export(logRatioPlot)
export(mapDGEobj)
export(obsPlot)
export(obsPlot2)
export(plotDispersion)
export(plotNorm)
export(plotPvalHist)
export(profilePlot)
export(volcanoPlot)
import(ggplot2)
import(ggrepel)
import(magrittr)
importFrom(DGEobj,getItem)
importFrom(assertthat,assert_that)
importFrom(dplyr,arrange)
importFrom(dplyr,filter)
importFrom(dplyr,left_join)
importFrom(dplyr,mutate)
importFrom(dplyr,select)
importFrom(edgeR,DGEList)
importFrom(edgeR,calcNormFactors)
importFrom(edgeR,estimateDisp)
importFrom(ggrepel,geom_text_repel)
importFrom(grid,viewport)
importFrom(igraph,graph_from_data_frame)
importFrom(limma,plotMDS)
importFrom(matrixStats,colVars)
importFrom(stats,as.dist)
importFrom(stats,cmdscale)
importFrom(stats,median)
importFrom(stats,sd)
importFrom(stringr,str_c)
importFrom(tibble,column_to_rownames)
importFrom(tibble,rownames_to_column)
importFrom(tibble,tibble)
importFrom(tidyr,gather)
importFrom(utils,packageVersion)