ABITrace method getImageReverted to represent RC of trace.

[el1jaC]

Hello and sorry for my english!

For my needs i developed a custom method in ABITrace.java that returns the trace's reverse complement counterpart .

I've used Apache Commons, but i can rewrite the piece of code using pure Java API.

Is it possible to do a pull request to evaluate my code?

[josemduarte]

Sure pull requests are welcome! But please beware that the biojava-legacy project is only minimally maintained.

What would be really cool is to port the ABI reading feature to the current biojava. See biojava/biojava#574 and biojava/biojava#535

Once in the active biojava project it would be actively maintained, so its lifetime would be greatly extended.

[heuermh]

@el1jaC Please do submit a pull request here, and then as @josemduarte says, if you have time to port to the current code biojava/biojava codebase and pull request there, it would be appreciated.

[el1jaC]

Hi @josemduarte and @heuermh ,

sure I'll try to port the code of ABITrace.java in new biojava repository, but it may take a bit of time.
Is there a definite deadline about this?

[lafita]

We welcome pull requests and contributions anytime, so there is no deadline really. As soon as you think the code is ready you can submit it.

[el1jaC]

In order to porting code in new biojava repository, are you using some IDE to mantain it?

[josemduarte]

The IDE that you use is your choice. Personally I like Eclipse, although I'm also using IntelliJ these days and it is pretty impressive.

In any case we are not enforcing any formatting standards at the moment if that's your question.

[el1jaC]

Are you using community edition of IntelliJ?

Actually I'm using Netbeans, and I feel really good with him :)

But I love Jetbrains products, and Intellij seems to be the best Java IDE right now.