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Expand file tree Collapse file tree Original file line number Diff line number Diff line change @@ -151,9 +151,7 @@ def substitute_sentence_template(
151151 if r"{evidence}" in template :
152152 evidence_str = ", " .join (sorted (list ({e ["displayName" ] for e in evidence })))
153153 if link_url :
154- evidence_str = (
155- f'<a href="{ link_url } " target="_blank" rel="noopener">{ evidence_str } </a>'
156- )
154+ evidence_str = f'<a href="{ link_url } " target="_blank" rel="noopener">{ evidence_str } </a>'
157155 result = result .replace (r"{evidence}" , evidence_str )
158156
159157 return result
@@ -248,7 +246,9 @@ def display_variants(gene_name: str, variants: List[IprVariant]) -> str:
248246 result = sorted (list ({v for v in [display_variant (e ) for e in variants ] if gene_name in v }))
249247 variants_text = natural_join (result )
250248 if len (result ) > 1 :
251- return f"Multiple variants of the gene { gene_name } were observed in this case: { variants_text } "
249+ return (
250+ f"Multiple variants of the gene { gene_name } were observed in this case: { variants_text } "
251+ )
252252 elif result :
253253 return f"{ variants_text [0 ].upper ()} { variants_text [1 :]} was observed in this case."
254254 return ""
@@ -305,16 +305,14 @@ def create_section_html(
305305 description = ". " .join (genes [0 ]["description" ].split (". " )[:2 ]) # type: ignore
306306 sourceId = genes [0 ].get ("sourceId" , "" )
307307
308- output .append (
309- f"""
308+ output .append (f"""
310309 <blockquote class="entrez_description" cite="{ ENTREZ_GENE_URL } /{ sourceId } ">
311310 { description } .
312311 </blockquote>
313312 <p>
314313 { variants_text }
315314 </p>
316- """
317- )
315+ """ )
318316
319317 sentences_used : Set [str ] = set ()
320318
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