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Performance Optimization Summary

Quick Summary

This PR implements performance optimizations across the OpenPIV codebase to reduce execution time and memory usage.

Files Changed

  • openpiv/pyprocess.py - Vectorized array operations, reduced copies
  • openpiv/validation.py - Eliminated unnecessary masked array copies
  • openpiv/filters.py - Conditional masked array creation
  • openpiv/test/test_performance.py - New performance validation tests (NEW)
  • PERFORMANCE_IMPROVEMENTS.md - Detailed documentation (NEW)

Key Optimizations

  1. Vectorized Operations: Replaced Python loops and list comprehensions with NumPy operations
  2. Reduced Array Copies: Eliminated unnecessary copy operations, especially with masked arrays
  3. Conditional Conversions: Only convert dtypes when necessary
  4. Optimized Border Checking: Use np.maximum/np.minimum instead of array indexing

Performance Gains

  • find_all_first_peaks: Fully vectorized, < 10ms for 100 windows
  • normalize_intensity: Conditional conversion, < 50ms for 50 windows
  • global_std: No copies for non-masked input, < 10ms for 100x100 arrays
  • replace_outliers: Conditional masking, < 100ms for 50x50 arrays

Testing

✅ All 198 existing tests pass ✅ 5 new performance tests added ✅ Total: 203 tests pass in ~8 seconds ✅ Tutorial scripts verified working

Backward Compatibility

✅ 100% backward compatible

  • Function signatures unchanged
  • Return types unchanged
  • Numerical results unchanged

Documentation

See PERFORMANCE_IMPROVEMENTS.md for:

  • Detailed before/after code comparisons
  • Performance metrics
  • Future optimization opportunities
  • General optimization principles

Impact

These optimizations particularly benefit:

  • Large PIV analysis with many interrogation windows
  • Iterative refinement algorithms
  • High-resolution image processing
  • Batch processing workflows