From 947b617ecca7838af23197063f9b2b33c71f0ea6 Mon Sep 17 00:00:00 2001 From: Agah Date: Fri, 9 May 2025 09:05:01 -1000 Subject: [PATCH 1/7] Create runtime.txt --- runtime.txt | 1 + 1 file changed, 1 insertion(+) create mode 100644 runtime.txt diff --git a/runtime.txt b/runtime.txt new file mode 100644 index 0000000..d2aca3a --- /dev/null +++ b/runtime.txt @@ -0,0 +1 @@ +python-3.12 From 9cff085ab166e2254aee6464aa022e4def617279 Mon Sep 17 00:00:00 2001 From: Agah Date: Fri, 9 May 2025 09:28:13 -1000 Subject: [PATCH 2/7] Create postBuild --- postBuild | 5 +++++ 1 file changed, 5 insertions(+) create mode 100644 postBuild diff --git a/postBuild b/postBuild new file mode 100644 index 0000000..fd5c523 --- /dev/null +++ b/postBuild @@ -0,0 +1,5 @@ +#!/bin/bash + +mkdir -p examples/data +curl -L "https://zenodo.org/api/records/14259406/files-archive" -o example_dataset.zip +unzip example_dataset.zip -d examples/data From cbcdc8114394f765558713882167eb22f305c61a Mon Sep 17 00:00:00 2001 From: Agah Date: Fri, 9 May 2025 09:48:40 -1000 Subject: [PATCH 3/7] Rename runtime.txt to binder/runtime.txt --- runtime.txt => binder/runtime.txt | 0 1 file changed, 0 insertions(+), 0 deletions(-) rename runtime.txt => binder/runtime.txt (100%) diff --git a/runtime.txt b/binder/runtime.txt similarity index 100% rename from runtime.txt rename to binder/runtime.txt From c90f1ee891a9bcab8cba4af297cd047a4757d98a Mon Sep 17 00:00:00 2001 From: Agah Date: Fri, 9 May 2025 09:48:57 -1000 Subject: [PATCH 4/7] Rename postBuild to binder/postBuild --- postBuild => binder/postBuild | 0 1 file changed, 0 insertions(+), 0 deletions(-) rename postBuild => binder/postBuild (100%) diff --git a/postBuild b/binder/postBuild similarity index 100% rename from postBuild rename to binder/postBuild From e51f1b08a9a0bffbc945d358dece1d863051b72b Mon Sep 17 00:00:00 2001 From: Agah Date: Fri, 9 May 2025 09:49:27 -1000 Subject: [PATCH 5/7] Create requirements.txt --- binder/requirements.txt | 8 ++++++++ 1 file changed, 8 insertions(+) create mode 100644 binder/requirements.txt diff --git a/binder/requirements.txt b/binder/requirements.txt new file mode 100644 index 0000000..0ffd352 --- /dev/null +++ b/binder/requirements.txt @@ -0,0 +1,8 @@ +nibabel +numpy +pandas +pytest +rtree +scikit-image +tqdm +trimesh From 97159dfcebb761d01d1fbbaac2342df3638715fe Mon Sep 17 00:00:00 2001 From: Agah Date: Fri, 9 May 2025 09:49:57 -1000 Subject: [PATCH 6/7] Update requirements.txt --- binder/requirements.txt | 1 + 1 file changed, 1 insertion(+) diff --git a/binder/requirements.txt b/binder/requirements.txt index 0ffd352..2f96204 100644 --- a/binder/requirements.txt +++ b/binder/requirements.txt @@ -6,3 +6,4 @@ rtree scikit-image tqdm trimesh +qlayers From 4b2001608161fb924ee50120efea4355e2bdcafb Mon Sep 17 00:00:00 2001 From: Agah Date: Fri, 9 May 2025 10:03:13 -1000 Subject: [PATCH 7/7] Update requirements.txt --- binder/requirements.txt | 2 ++ 1 file changed, 2 insertions(+) diff --git a/binder/requirements.txt b/binder/requirements.txt index 2f96204..ad38b83 100644 --- a/binder/requirements.txt +++ b/binder/requirements.txt @@ -7,3 +7,5 @@ scikit-image tqdm trimesh qlayers +matplotlib +seaborn