Version 2.7.1

Author: abrechts

pages/10ExperimentTabs.html

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pages/11CreateOwnUserID.html

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pages/1CreateExperiment.html

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-  <meta name="generator" content="HelpNDoc Standard Edition 9.8.0.588">
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pages/2EditReactionSketch.html

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   <meta charset="utf-8" />
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-  <meta name="generator" content="HelpNDoc Standard Edition 9.8.0.588">
+  <meta name="generator" content="HelpNDoc Standard Edition 9.9.0.637">
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@@ -205,10 +205,10 @@ <h2>2) Edit Reaction Sketch</h2>
  <tr style="vertical-align: top;">
   <td style="border-width : 1px; border-color: #000000; border-style: solid; padding: 1px; border-right: none; border-left: none; width: 785px;">
    <p class="rvps8"><span class="rvts19">Drawing Multiple Reactants:</span><span class="rvts18">&nbsp;</span></p>
-   <p class="rvps8"><span class="rvts17">While a reaction sketch may contain any number of reactants, </span><span class="rvts8">Phoenix ELN</span><span class="rvts17"> only supports the </span><span class="rvts21">leftmost</span><span class="rvts17"> one (i.e. the reference reactant) for integration into the protocol. This is by design, not a technical limitation. It prevents the often observed behavior of drawing </span><span class="rvts21">reagents</span><span class="rvts17"> as additional reactants, with the intent to add them later to the protocol this way. However, this is a time consuming and highly inefficient approach.&nbsp;</span></p>
-   <p class="rvps8"><span class="rvts17">In </span><span class="rvts8">Phoenix ELN, t</span><span class="rvts17">he way to add reagents is much simpler: Reagents (and other materials) most efficiently are added from the self-learning materials database, along with their stored properties like molecular weight, density, etc. This just takes a mouse click and a few key strokes and you are done. See the </span><a class="rvts20" href="3AddMaterials.html">add materials</a><span class="rvts17"> topic for more details. Apart from significantly speeding up your workflow, this also helps to keep your reaction sketch concise and uncluttered.</span></p>
-   <p class="rvps8"><img alt="" style="width : 196px; height : 128px; padding : 1px;" src="lib/Toolbar_AddReagent.jpg"><span class="rvts19"> &nbsp; &nbsp;</span></p>
-   <p class="rvps8"><span class="rvts17">Note: Other than for reactants, all additional sketch </span><span class="rvts21">products</span><span class="rvts17"> can be added individually to the protocol, thus also allowing for side product yield calculations.</span></p>
+   <p class="rvps8"><span class="rvts17">While a reaction sketch may contain any number of reactants, </span><span class="rvts8">Phoenix ELN</span><span class="rvts17"> only supports the </span><span class="rvts21">leftmost</span><span class="rvts17"> reactant in a reaction sketch (i.e. the reference reactant) for protocol integration. This is by design, not a technical limitation. It prevents the often observed but highly inefficient and time consuming approach of drawing </span><span class="rvts21">reagents</span><span class="rvts17"> as additional reactants.&nbsp;</span></p>
+   <p class="rvps8"><span class="rvts17">Instead, the </span><span class="rvts13">Addition</span><span class="rvts17"> toolbar allows to add reagents (and also other materials) to the protocol by the click of a button from (see screen shot below). No drawing is required, since the self-learning materials database provides properties like molecular weight, density, etc in the background. See the </span><a class="rvts20" href="3AddMaterials.html">add materials</a><span class="rvts17"> topic for more details. Apart from significantly speeding up your workflow, this also helps to keep your reaction sketch concise and uncluttered.</span></p>
+   <p class="rvps8"><span class="rvts19">&nbsp; &nbsp; </span><img alt="" style="width : 156px; height : 137px; padding : 1px;" src="lib/rxnSketch_AddMaterial.png"></p>
+   <p class="rvps8"><span class="rvts21">Note</span><span class="rvts17">: Other than for reactants, all additional sketch </span><span class="rvts21">products</span><span class="rvts17"> are supported by the experiment protocol, to allow side product yield calculations.</span></p>
    <p class="rvps8"><span class="rvts17"><br/></span></p>
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pages/3AddMaterials.html

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   <meta charset="utf-8" />
   <meta http-equiv="X-UA-Compatible" content="IE=edge" />
-  <meta name="generator" content="HelpNDoc Standard Edition 9.8.0.588">
+  <meta name="generator" content="HelpNDoc Standard Edition 9.9.0.637">
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@@ -198,7 +198,7 @@ <h2>3) Add Materials</h2>
 <p class="rvps3"><span class="rvts8">At this stage, our experiment protocol contains the default workflow separator "Reaction" and the reference starting material:</span></p>
 <p class="rvps3"><img alt="" style="width : 356px; height : 100px; padding : 1px;" src="lib/Protocol-2-items.png"></p>
 <p class="rvps3"><span class="rvts8">Now let's add a reagent</span><span class="rvts17">, </span><span class="rvts8">say 'Triethylamine'. The </span><span class="rvts13">Protocol Toolbar</span><span class="rvts23">,</span><span class="rvts8"> located just below the protocol, allows us add materials and other items to the protocol. So move the mouse over the </span><span class="rvts13">Add Material</span><span class="rvts8"> button (no mouse click required), and the popup menu below opens.</span></p>
-<p class="rvps10"><span class="rvts8">&nbsp;</span><img alt="" style="width : 217px; height : 142px; padding : 1px;" src="lib/Toolbar_AddReagent.jpg"></p>
+<p class="rvps10"><span class="rvts8">&nbsp;</span><img alt="" style="width : 180px; height : 158px; padding : 1px;" src="lib/rxnSketch_AddMaterial.png"></p>
 <p class="rvps13"><span class="rvts8">Select </span><span class="rvts13">Reagent </span><span class="rvts23">from above popup menu</span><span class="rvts8">, which opens the </span><span class="rvts13">Add</span><span class="rvts8"> </span><span class="rvts13">Reagent </span><span class="rvts8">dialog. In this dialog, for our example, first enter '1.5' and select 'eq' (equivalents). Now type 'tri' into the name field. This opens a list of reagents originating from the built-in materials database, starting with the currently typed characters.</span></p>
 <div class="rvps3">
 <table width="75%" style="border-width: 0px; border-spacing: 2px; padding: 12px 0px;">

pages/4AddComments.html

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   <meta charset="utf-8" />
   <meta http-equiv="X-UA-Compatible" content="IE=edge" />
-  <meta name="generator" content="HelpNDoc Standard Edition 9.8.0.588">
+  <meta name="generator" content="HelpNDoc Standard Edition 9.9.0.637">
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@@ -196,7 +196,7 @@ <h2>4) Add Comments</h2>
 
 <hr style="height : 1px; background-color : #000000; border-style : none;">
 <p class="rvps3"><span class="rvts8">Of course we also need to add text to the protocol to describe our conditions, timings and observations wherever approriate. So let's add a </span><span class="rvts13">Comment</span><span class="rvts8"> protocol element via the </span><span class="rvts13">Protocol Toolbar</span><span class="rvts8">:</span></p>
-<p class="rvps11"><img alt="" style="width : 408px; height : 44px; padding : 1px;" src="lib/Comment_Button.png"></p>
+<p class="rvps11"><img alt="" style="width : 400px; height : 44px; padding : 1px;" src="lib/AddToolBar_AddComments.png"></p>
 <p class="rvps3"><span class="rvts8">After clicking the </span><span class="rvts13">Add Comment</span><span class="rvts8"> button, the protocol should look like below:</span></p>
 <p class="rvps3"><img alt="" style="width : 282px; height : 163px; padding : 1px; margin : 6px 0px;" src="lib/Comment_Empty.png"></p>
 <div class="rvps3">
@@ -213,7 +213,7 @@ <h2>4) Add Comments</h2>
 <p class="rvps11"><img alt="" style="width : 248px; height : 226px; padding : 1px;" src="lib/Comment_ContextMenu.png"></p>
 <p class="rvps9"><span class="rvts8">Thus, a typical comment might look like below. Note how a bullet list can visualize a sequence of actions in a concise manner. Also, the available text markers can highlight important parts of your comments.</span></p>
 <p class="rvps11"><img alt="" style="width : 464px; height : 78px; padding : 1px;" src="lib/Comment_Example.png"></p>
-<p class="rvps11"><span class="rvts29">Spell checking</span><span class="rvts8"> occurs for your entered text, if specified in the main toolbar (see</span><a class="rvts14" href="SpellChecking.html"> Spell Checking</a><span class="rvts8">).</span></p>
+<p class="rvps11"><span class="rvts8">If a </span><span class="rvts29">spell check</span><span class="rvts8"> language is selected in the application toolbar, then spell checking occurs for your Comment content (see</span><a class="rvts14" href="SpellChecking.html"> Spell Checking</a><span class="rvts8">).</span></p>
 <p class="rvps11"><img alt="" style="width : 172px; height : 226px; padding : 1px;" src="lib/SpellCheck_Language%201.png"></p>
 <p class="rvps11"><span class="rvts8"></span><span class="rvts8"></span></p>
 

pages/5AddImagesDocuments.html

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   <meta charset="utf-8" />
   <meta http-equiv="X-UA-Compatible" content="IE=edge" />
-  <meta name="generator" content="HelpNDoc Standard Edition 9.8.0.588">
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@@ -198,11 +198,11 @@ <h2>5) Add Images &amp; Documents</h2>
 <p class="rvps3"><span class="rvts8">Images and documents can be embedded directly into the protocol workflow, either via drag/drop, or via a file selection dialog. There's an upper limit of 10 MB per embedded file, and the maximum </span><span class="rvts17">total</span><span class="rvts8"> file size per experiment is 50 MB. &nbsp;</span></p>
 <p class="rvps17"><span class="rvts15">Embed via Drag &amp; Drop</span></p>
 <p class="rvps13"><span class="rvts8">Images and documents can be inserted by dragging them from the desktop or the file explorer, and dropping them into the desired protocol location. Also multiple items can be dragged/dropped in a single operation. While dragging the desired item(s) over the protocol, a blue insertion marker provides feedback on the insertion point after dropping.</span></p>
-<p class="rvps13"><img alt="" style="width : 418px; height : 111px; padding : 1px;" src="lib/Images_DragDrop.png"><span class="rvts8">.</span></p>
+<p class="rvps13"><img alt="" style="width : 431px; height : 114px; padding : 1px;" src="lib/Images_DragDrop.png"><span class="rvts8">.</span></p>
 <hr style="height : 1px; background-color : #000000; border-style : none;">
 <p class="rvps16"><span class="rvts15">Embed via File Dialog</span></p>
-<p class="rvps13"><span class="rvts8">Alternatively, images and documents can be added via a file selection dialog: Choose the </span><span class="rvts13">Images/Documents</span><span class="rvts8"> menu item in the </span><span class="rvts13">Protocol Toolbar</span><span class="rvts8"> </span><span class="rvts13">. </span><span class="rvts8">A file selection dialog appears, from which the desired image(s) and/or document(s) can be selected. The selection of multiple items is possible..</span></p>
-<p class="rvps12"><img alt="" style="width : 319px; height : 82px; padding : 1px;" src="lib/Images_ProtocolToolbar.png"></p>
+<p class="rvps10"><span class="rvts8">Alternatively, images and documents can be added via a file selection dialog: Choose the </span><span class="rvts13">Images/Documents</span><span class="rvts8"> menu item in the </span><span class="rvts13">Protocol Toolbar</span><span class="rvts8"> </span><span class="rvts13">. </span><span class="rvts8">A file selection dialog appears, from which the desired image(s) and/or document(s) can be selected. The selection of multiple items is possible..</span></p>
+<p class="rvps12"><span class="rvts8">&nbsp;</span><img alt="" style="width : 325px; height : 86px; padding : 1px;" src="lib/AddToolbar_AddFile.png"></p>
 <hr style="height : 1px; background-color : #000000; border-style : none;">
 <p class="rvps16"><span class="rvts15">Imported Images</span></p>
 <p class="rvps3"><span class="rvts8">The protocol handles image and document file types differently. Let's have a look a images first. After their import, images are represented as fixed height thumbnails with a editable image description area to their right. Left-click the thumbnail representation to view the image in </span><span class="rvts13">full screen</span><span class="rvts8"> resolution.</span></p>

pages/6AddWorkflowSeparators.html

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   <meta charset="utf-8" />
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-  <meta name="generator" content="HelpNDoc Standard Edition 9.8.0.588">
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@@ -207,7 +207,7 @@ <h2>6 Add Workflow Separators</h2>
 </table>
 </div>
 <p class="rvps3"><span class="rvts8">So let's add a new workflow separator via the </span><span class="rvts13">Protocol Toolbar</span><span class="rvts8">:</span></p>
-<p class="rvps18"><img alt="" style="width : 312px; height : 81px; padding : 1px;" src="lib/Separator_Toolbar.png"></p>
+<p class="rvps18"><img alt="" style="width : 320px; height : 79px; padding : 1px;" src="lib/AddToolBar_AddSeparator.png"></p>
 <p class="rvps3"><span class="rvts8">The resulting protocol now looks like below:</span></p>
 <p class="rvps11"><img alt="" style="width : 402px; height : 88px; padding : 1px;" src="lib/Separator_EditTitle.png"></p>
 <p class="rvps9"><span class="rvts8">The title of the new workflow separator is in edit mode now, therefore you can directly type a title of your choice, followed by the ENTER or ESC key. So let's type 'Purification' here:</span></p>

pages/7AddProducts.html

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-  <meta name="generator" content="HelpNDoc Standard Edition 9.8.0.588">
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@@ -196,7 +196,7 @@ <h2>7) Add Products</h2>
 
 <hr style="height : 1px; background-color : #000000; border-style : none;">
 <p class="rvps3"><span class="rvts8">Let's next add a </span><span class="rvts13">Product</span><span class="rvts8"> from the </span><span class="rvts13">Add Material</span><span class="rvts33"> </span><span class="rvts8">menu button. Note that a reaction yield will only be calculated after the addition of a reference product protocol element.</span></p>
-<p class="rvps11"><img alt="" style="width : 232px; height : 138px; padding : 1px;" src="lib/AddProduct_Toolbar.png"></p>
+<p class="rvps11"><span class="rvts8">&nbsp;</span><img alt="" style="width : 226px; height : 146px; padding : 1px;" src="lib/AddToolBar_AddProduct.png"></p>
 <p class="rvps3"><span class="rvts8">Selecting the </span><span class="rvts13">Product</span><span class="rvts8"> menu item opens the dialog below, where you enter the obtained product amount and optionally other available properties:</span></p>
 <p class="rvps19"><img alt="" style="width : 286px; height : 229px; padding : 1px;" src="lib/Product_DlgOneProd.png"></p>
 <div class="rvps3">

pages/8ManageProtocolElements.html

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