LOGAN/mkdocs.yml at main · abcsFrederick/LOGAN · GitHub

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site_name: CCBR LOGAN
site_author: CCR Collaborative Bioinformatics Resource
site_url: https://ccbr.github.io/LOGAN
site_description: >-
  CCBR whoLe genOme-sequencinG Analysis pipeliNe (LOGAN)
repo_name: CCBR/LOGAN
repo_url: https://github.com/CCBR/LOGAN
edit_uri: https://github.com/CCBR/LOGAN/edit/main/

# Copyright
copyright: Copyright &copy; 2023-{{ now().year }} CCR Collaborative Bioinformatics Resource

# Configuration
theme:
  name: readthedocs
  locale: en
  custom_dir: docs/overrides

# Plugins
plugins:
  - search
  - git-revision-date
  - minify:
      minify_html: true

# Customization
extra:
  social:
    - icon: fontawesome/solid/users
      link: http://bioinformatics.cancer.gov
    - icon: fontawesome/brands/github
      link: https://github.com/CCBR
    - icon: fontawesome/brands/docker
      link: https://hub.docker.com/orgs/nciccbr/repositories

extra_css:
  - css/custom.css
extra_javascript:
  - js/custom.js

# Extensions
markdown_extensions:
  - pymdownx.snippets:
      check_paths: true

nav:
  - Home: "index.md"
  - Pipeline:
      - Tumor-Normal: "user-guide/pipeline.md"
  - Tools:
      - Comparisons: "user-guide/tool_comparisons.md"