MetCell/NAMESPACE at main · ZhuMetLab/MetCell · GitHub

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# Generated by roxygen2: do not edit by hand

export(AlignPeakParam)
export(AlignPeakParamRaw)
export(BinPrecursorParam)
export(CombineParam)
export(CorrectRTLandmarksParam)
export(DereplicatePeaksParam)
export(DetectEIMPeaksParam)
export(DiscoverSCEventsParam)
export(Experiment)
export(ExtractIMDataParam)
export(ExtractIMMSMSParam)
export(ExtractIndividualCellParam)
export(ExtractSCIMDataParam)
export(FillPeakParam)
export(FinalizeFeatureIOIParam)
export(FinalizeFeatureParam)
export(GaussianSmoothParam)
export(GroupDensityParam)
export(IsotopeParam)
export(LOESSSmoothParam)
export(MatchBetweenRunParam)
export(MatchParam)
export(QueryImsDataParam)
export(QueryTimsDataParam)
export(QueryTimsDataSegmentParam)
export(ReadSpectraParam)
export(SCMatchParam)
export(SearchParam)
export(SearchPeakTargetParam)
export(TrimSCTimsDataParam)
export(UniteCellSuperpositionFrameParam)
exportClasses(DDAExperiment)
exportClasses(DIAExperiment)
exportClasses(Experiment)
exportClasses(IMData)
exportClasses(SingleCellExperiment)
exportClasses(SingleCellLipidomicsExperiment)
exportClasses(TimsData)
exportMethods(AlignPeaks)
exportMethods(BinPrecursors)
exportMethods(CorrectRT)
exportMethods(DereplicatePeaks)
exportMethods(DetectEIMPeaks)
exportMethods(DiscoverSCEvents)
exportMethods(DropProfile)
exportMethods(ExtractIMData)
exportMethods(ExtractIMMSMS)
exportMethods(ExtractIMMSMS_DTIM)
exportMethods(ExtractIndividualCell)
exportMethods(ExtractSCIMData)
exportMethods(FillPeaks)
exportMethods(FillPeaks_IOI)
exportMethods(FillSCPeaks)
exportMethods(FinalizeFeatures)
exportMethods(FinalizeFeatures_DIA)
exportMethods(FinalizeFeatures_DTIM)
exportMethods(FinalizeFeatures_IOI)
exportMethods(GenerateMS2)
exportMethods(GetPeakInfo)
exportMethods(GroupPeaks)
exportMethods(GroupSCPeaks)
exportMethods(IdentifyPeaks)
exportMethods(IdentifyPeaks_input_library)
exportMethods(IdentifySCPeaks)
exportMethods(ImsData)
exportMethods(InterpolateEIM)
exportMethods(MatchBetweenRuns)
exportMethods(MatchBetweenRuns_DTIM_IOI)
exportMethods(MatchBetweenRuns_IOI)
exportMethods(QueryImsData)
exportMethods(QueryImsmsData)
exportMethods(QueryTimsData)
exportMethods(QueryTimsDataSegment)
exportMethods(QueryTimsData_DIA)
exportMethods(QueryTimsData_MS2)
exportMethods(ReadSpectraData)
exportMethods(SearchPeakTargets)
exportMethods(SetData)
exportMethods(SetInfo)
exportMethods(SmoothData)
exportMethods(TimsData)
exportMethods(TrimSCTimsData)
exportMethods(UniteCellSuperpositionFrame)
exportMethods(as.list)
exportMethods(plot)
exportMethods(show)
import(BiocParallel)
import(Rcpp)
import(RcppProgress)
import(SpectraTools)
import(collapse)
import(data.table)
import(dplyr)
import(fastmatch)
import(ggpmisc)
import(mzR)
import(opentimsr)
import(parallel)
import(smoother)
import(splus2R)
importFrom(Rcpp,evalCpp)
importFrom(data.table,":=")
importFrom(plyr,rbind.fill)
useDynLib(MetCell)