IsoNet/NEWS at main · ZhuMetLab/IsoNet · GitHub

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## Version 0.1.00 (20220902)
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o initial release version


## Version 0.1.01 (20220906)
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o fix bugs: untransfered type parameter lead unconsistent MID score
o fix bugs: no edge label


## Version 0.1.02 (20220923)
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o fix bugs: filtering MS2 matched pairs using n_frag_total instead of n_frag_match
o add parallel processing function


## Version 0.1.03 (20220924)
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o change parallel running function


## Version 0.1.04 (20221202)
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o change consin to Manhattan MID similarity caculation methods


## Version 0.1.05 (20221223)
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o change the MID similarity methods of features with same C number.
  type II to type I


## Version 0.1.06 (20230131)
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o edge annotation tolerance 0.002 Da.
o change library table(KEGG).
o output reaction class and freq.


## Version 0.2.01 (20230131)
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o add ID results to the final table.
o add reaction step (calculateStep)


## Version 0.2.02 (20230203)
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o fix output bug of MID calculation(motif source and type)
o change library table(KEGG).simple name,redefined reaction class,C_diff
o output C_diff.


## Version 0.2.03 (20230209)
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o fix output bug of MID calculation(change same C carbon number judgement code module position,include type I and type II with same C number)
o update delta mass lib (unique mass,more than 1)


## Version 0.2.04 (20230214)
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o consider the adduct forms in function addEdgeLabel
o output all reaction classes
o add parameter to trim the mass difference table (mass_diff_freq_cut_off)
o modify the reaction type


## Version 0.2.05 (20230317)
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o debug ignore_max parameter


## Version 0.2.06 (20230318)
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o Debug mass difference calculation
o Modify output files


## Version 0.2.07 (20230328)
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o Modify the output of the package


## Version 0.2.08 (20230420)
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o Add "|" to the "From" and "To" column
o Modify the path of final result
o Modify the some variates according to the inputted ID table


## Version 0.2.09 (20230420)
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o Debug the polarity recognization during adding edge labels.


## Version 0.2.10 (20230428)
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o Debug mz match during edge annotation.


## Version 0.2.11 (20230924)
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o Add RT filter for edge annotations.


## Version 0.2.12 (20230924)
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o Modify the colnames of the output file.
o Rename the package.


## Version 0.2.13 (20231020)
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o Debug removing features without MS2 during file checking.