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Module.py
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142 lines (120 loc) · 5.81 KB
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from Model import *
from utils import loss_sparsity, loss_divergence, set_est_graph_kernel, loss_mmd
import os
import torch.optim as optim
from torch.optim import lr_scheduler
import numpy as np
import time
from tqdm import tqdm
def ENCODER_i(data_loader, idx, n_in, n_hid, num_node, do_prob, num_epoch, lr, weight_decay, log, val_file):
net = encoder_TRDCDL(n_in, n_hid, num_node, do_prob)
net = net.cuda()
optimizer = optim.Adam(net.parameters(), lr=lr, weight_decay=weight_decay)
scheduler = lr_scheduler.StepLR(optimizer, step_size=400, gamma=0.3)
loss_val = nn.MSELoss()
best_loss = np.inf
for epoch in range(num_epoch):
scheduler.step()
t = time.time()
Loss = []
mse_loss = []
for data, id, group in data_loader:
data = data.unsqueeze(3)
data = data.cuda()
target = data[:, 1:, idx,:]
optimizer.zero_grad()
data_hat = net(data[:, :-1, :, :])
mse = loss_val(data_hat, target)
loss = mse
loss.backward()
optimizer.step()
mse_loss.append(mse.item())
Loss.append(loss.item())
if np.mean(mse_loss) < best_loss:
best_loss = np.mean(mse_loss)
torch.save(net.state_dict(), val_file)
log.flush()
def ENCODER(data_loader, n_in, n_hid, num_node, num_epoch, lr, weight_decay, save_folder, do_prob=0.):
log_file = os.path.join(save_folder, 'log_val.txt')
log = open(log_file, 'w')
print('Begin training VALNet')
for idx in tqdm(range(num_node)):
val_file = 'VALNet' + str(idx) + '.pt'
val_file = os.path.join(save_folder, val_file)
ENCODER_i(data_loader, idx, n_in, n_hid, num_node, do_prob, num_epoch, lr, weight_decay, log, val_file)
log.close()
def DNGC_DCV_i(data_loader, idx, n_in, n_hid, num_node, do_prob, graph_kernel, num_epoch, lr, weight_decay,
sparsity_type, divergence_type,
beta_sparsity, beta_kl, beta_mmd, beta_prior, log, est_file, n_in_val, n_hid_val, val_file):
val_net = encoder_TRDCDL(n_in_val, n_hid_val, num_node)
val_net.load_state_dict(torch.load(val_file))
val_net = val_net.cuda()
val_net.eval()
# NOTE 逆序,将得到的逆序因果阵先验转置
graph_kernel1 = graph_kernel.permute(1,0)
this_kernel = graph_kernel1[:,idx].cuda()
# # NOTE lorenz逆序,将得到的逆序因果阵先验转置
# graph_kernel1 = graph_kernel
# this_kernel = graph_kernel1[:,idx].cuda()
est_net = DCV(graph_kernel1, n_in, n_hid, 1, do_prob)
est_net = est_net.cuda()
optimizer = optim.Adam(est_net.parameters(), lr=lr, weight_decay=weight_decay)
scheduler = lr_scheduler.StepLR(optimizer, step_size=400, gamma=0.3)
loss_mse = nn.MSELoss()
loss_ce = nn.CrossEntropyLoss()
best_loss = np.inf
for epoch in range(num_epoch):
scheduler.step()
t = time.time()
Loss = []
MSE_loss = []
SPA_loss = []
KL_loss = []
MMD_loss = []
for data, id, group in data_loader:
optimizer.zero_grad()
data = data.unsqueeze(3)
data = data.cuda()
# NOTE 逆序1 从时间轴上反转数据
data = torch.flip(data, dims=[1])
u, v, mask = est_net(data[:, :-1, :, :])
# NOTE 逆序 利用正向数据生成该结点对应的mask,反转时间轴,得到逆序mask
this_kernel0 = this_kernel.unsqueeze(0).unsqueeze(2).unsqueeze(3)
C_prior0 = torch.repeat_interleave(this_kernel0, mask.size(0),dim=0)
C_prior = torch.repeat_interleave(C_prior0, mask.size(2),dim=2)
mask = torch.flip(mask, dims=[2])
data0 = torch.flip(data, dims=[1])
inputs = mask_inputs(mask.permute(0,2,1,3), data0[:, :-1, :, :])
pred = val_net(inputs)
target = data0[:, 1:, idx, :]
mse_loss = loss_mse(pred, target)
spa_loss = beta_sparsity * loss_sparsity(mask, sparsity_type)
z_loss = beta_kl*(loss_divergence(u, divergence_type='entropy')+loss_divergence(v, divergence_type='entropy'))
C_prior_loss = beta_prior*loss_ce(mask, C_prior)
loss = mse_loss + spa_loss + z_loss + C_prior_loss
loss.backward()
optimizer.step()
Loss.append(loss.item())
MSE_loss.append(mse_loss.item())
SPA_loss.append(spa_loss.item())
KL_loss.append(z_loss.item())
MMD_loss.append(C_prior_loss.item())
if np.mean(Loss) < best_loss:
best_loss = np.mean(Loss)
torch.save(est_net.state_dict(), est_file)
log.flush()
def DNGC_DCV(data_loader, n_in, n_hid, num_node, num_epoch, lr, weight_decay, save_folder, n_in_val, n_hid_val,
sparsity_type='l2', divergence_type='entropy', do_prob=0., beta_sparsity=1, beta_kl=0.1, beta_mmd=1, beta_prior=0.1):
log_file = os.path.join(save_folder, 'log_est.txt')
log = open(log_file, 'w')
graph_kernel = set_est_graph_kernel(save_folder, n_in_val, n_hid_val, num_node)
print('Begin training ESTNet')
for idx in tqdm(range(num_node)):
val_file = 'VALNet' + str(idx) + '.pt'
val_file = os.path.join(save_folder, val_file)
est_file = 'ESTNet' + str(idx) + '.pt'
est_file = os.path.join(save_folder, est_file)
DNGC_DCV_i(data_loader, idx, n_in, n_hid, num_node, do_prob, graph_kernel, num_epoch, lr, weight_decay,
sparsity_type, divergence_type,
beta_sparsity, beta_kl, beta_mmd, beta_prior, log, est_file, n_in_val, n_hid_val, val_file)
log.close()