-
Notifications
You must be signed in to change notification settings - Fork 0
Expand file tree
/
Copy pathcompound_key.txt
More file actions
63 lines (63 loc) · 7.71 KB
/
compound_key.txt
File metadata and controls
63 lines (63 loc) · 7.71 KB
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
Compound Name substrate_classification pathway or gene (if multiple options, separated by pipe) notes
Butein polyphenols;Flavonoids;Chalcones CHI converted to the flavanone form by CHI
Xanthohumol polyphenols;Flavonoids;Chalcones CHI not cleaved by FCR, presumed to be used by CHI
Phloretin polyphenols;Flavonoids;Dihydrochalcones PHY hydrolyzed by PHY
Dihydroquercetin (taxifolin) polyphenols;Flavonoids;Dihydroflavonols flavonol/flavanonol degradation to phloroglucinol (anoxic) converted to alphitonin by CHI, FCR cleaves to 2-hydroxy-1-(2,4,6-trihydroxyphenyl)-3-(3,4-dihydroxyphenyl)propan-1-one
(+)-Catechin polyphenols;Flavonoids;Flavanols not cleaved by FCR, experimental evidence suggests conversion to taxifolin through unknown mechanism
(-)-Epicatechin polyphenols;Flavonoids;Flavanols not cleaved by FCR, experimental evidence suggests conversion to taxifolin through unknown mechanism
Naringenin polyphenols;Flavonoids;Flavanones flavone/flavanone degradation to phloroglucinol (anoxic)|flavanone degradation (oxic) FCR cleaves naringenin to phloretin
Eriodictyol polyphenols;Flavonoids;Flavanones flavone/flavanone degradation to phloroglucinol (anoxic)|flavanone degradation (oxic) FCR cleaves eriodictyol to 3-hydroxyphloretin
Hesperetin polyphenols;Flavonoids;Flavanones flavone/flavanone degradation to phloroglucinol (anoxic) not cleaved by FCR
Isoxanthohumol polyphenols;Flavonoids;Flavanones flavone/flavanone degradation to phloroglucinol (anoxic) not cleaved by FCR
Homoeriodictyol polyphenols;Flavonoids;Flavanones flavone/flavanone degradation to phloroglucinol (anoxic) FCR cleaves to 3-(4-hydroxy-3-methoxyphenyl)-1-(2,4,6-trihydroxyphenyl)propan-1-one
Apigenin polyphenols;Flavonoids;Flavones flavone/flavanone degradation to phloroglucinol (anoxic)|flavone degradation (oxic) reduced by FLR to naringenin, not cleaved by FCR
Luteolin polyphenols;Flavonoids;Flavones flavone/flavanone degradation to phloroglucinol (anoxic)|flavone degradation (oxic) reduced by FLR to eriodictyol
Chrysin polyphenols;Flavonoids;Flavones flavone/flavanone degradation to phloroglucinol (anoxic) reduced by FLR
Kaempferol polyphenols;Flavonoids;Flavonols flavonol/flavanonol degradation to phloroglucinol (anoxic) reduced by FLR
Quercetin polyphenols;Flavonoids;Flavonols flavonol/flavanonol degradation to phloroglucinol (anoxic)|quercetin degradation (oxic) reduced by FLR, not cleaved by FCR
Myricetin polyphenols;Flavonoids;Flavonols flavonol/flavanonol degradation to phloroglucinol (anoxic) reduced by FLR
Morin polyphenols;Flavonoids;Flavonols flavonol/flavanonol degradation to phloroglucinol (anoxic) reduced by FLR
Kaempferide polyphenols;Flavonoids;Flavonols flavonol/flavanonol degradation to phloroglucinol (anoxic) presumed, havent found biochemical validation
Galangin polyphenols;Flavonoids;Flavonols flavonol/flavanonol degradation to phloroglucinol (anoxic) presumed, havent found biochemical validation
Isorhamnetin polyphenols;Flavonoids;Flavonols flavonol/flavanonol degradation to phloroglucinol (anoxic) reduced by FLR
Rhamnetin polyphenols;Flavonoids;Flavonols flavonol/flavanonol degradation to phloroglucinol (anoxic) presumed, havent found biochemical validation
6,8-Dihydroxykaempferol polyphenols;Flavonoids;Flavonols flavonol/flavanonol degradation to phloroglucinol (anoxic) presumed, havent found biochemical validation
Daidzein polyphenols;Flavonoids;Isoflavonoids isoflavonoid conversion (anoxic)|isoflavonoid degradation (oxic) DZR converts
Formononetin polyphenols;Flavonoids;Isoflavonoids isoflavonoid conversion (anoxic) DZR converts
Genistein polyphenols;Flavonoids;Isoflavonoids isoflavonoid conversion (anoxic)|isoflavonoid degradation (oxic) DZR converts
Glycitein polyphenols;Flavonoids;Isoflavonoids isoflavonoid conversion (anoxic) DZR converts
Dihydrodaidzein polyphenols;Flavonoids;Isoflavonoids isoflavonoid conversion (anoxic) not cleaved by FCR
Dihydroformononetin polyphenols;Flavonoids;Isoflavonoids isoflavonoid conversion (anoxic) presumed, havent found biochemical validation
Dihydrogenistein polyphenols;Flavonoids;Isoflavonoids isoflavonoid conversion (anoxic) not cleaved by FCR
Dihydroglycitein polyphenols;Flavonoids;Isoflavonoids isoflavonoid conversion (anoxic) presumed, havent found biochemical validation
Equol polyphenols;Flavonoids;Isoflavonoids product of isoflavonoid conversion (anoxic)
Secoisolariciresinol polyphenols;Lignans;Lignans GLM
Lariciresinol polyphenols;Lignans;Lignans PinZ
Pinoresinol polyphenols;Lignans;Lignans pinoresinol conversion route 1 (anoxic)|pinoresinol conversion route 2 (anoxic)|pinoresinol conversion (oxic)
Sesamin polyphenols;Lignans;Lignans sesamin conversion (anoxic)
Enterodiol polyphenols;Lignans;Lignans EDL produced by CLD
Enterolactone polyphenols;Lignans;Lignans produced by EDL
Curcumin polyphenols;Other_polyphenols;Curcuminoids curcumin conversion
Vanillin polyphenols;Other_polyphenols;Hydroxybenzaldehydes vanillin conversion to vanillate (oxic)
Catechol polyphenols;Other_polyphenols;Other_polyphenols catechol degradation- meta-cleavage route 1 (oxic)|catechol degradation- meta-cleavage route 2 (oxic)|catechol degradation- ortho cleavage (oxic)
Pyrogallol polyphenols;Other_polyphenols;Other_polyphenols pyrogallol conversion to phloroglucinol (anoxic)
Phenol polyphenols;Other_polyphenols;Other_polyphenols phenol conversion to catechol (oxic)|phenol conversion to 4-hydroxybenzoate (anoxic)
Protocatechuic acid polyphenols;Phenolic_acids;Hydroxybenzoic_acids protocatechuic acid degradation- meta-cleavage (oxic)|protocatechuic acid degradation- ortho-cleavage (oxic)
Gallic acid polyphenols;Phenolic_acids;Hydroxybenzoic_acids gallate conversion to pyrogallol (anoxic)|gallate degradation (oxic)
Vanillic acid polyphenols;Phenolic_acids;Hydroxybenzoic_acids vanillate conversion to protocatechuate route 1 (oxic)|vanillate conversion to protocatechuate route 2 (oxic)
Gentisic acid polyphenols;Phenolic_acids;Hydroxybenzoic_acids gentisic acid degradation route 1 (oxic)|gentisic acid degradation route 2 (oxic)
4-Hydroxybenzoic acid polyphenols;Phenolic_acids;Hydroxybenzoic_acids 4-hydroxybenzoate conversion to benzoyl-coa (anoxic)
Syringic acid polyphenols;Phenolic_acids;Hydroxybenzoic_acids syringic acid coversion to 3-o-methylgallate (oxic)
Benzoic acid polyphenols;Phenolic_acids;Hydroxybenzoic_acids benzoate conversion to benzoyl-coa (oxic or anoxic)|benzoate degradation to catechol (oxic)|benzoate degradation to protocatechuic acid (oxic)
2,6-Dihydroxybenzoic acid polyphenols;Phenolic_acids;Hydroxybenzoic_acids resorcylic acid degradation (oxic)
p-Coumaric acid polyphenols;Phenolic_acids;Hydroxycinnamic_acids coumaric acid conversion (oxic)
Caffeic acid polyphenols;Phenolic_acids;Hydroxycinnamic_acids caffeate respiration (anoxic)
Ferulic acid polyphenols;Phenolic_acids;Hydroxycinnamic_acids ferulic acid conversion to vanillin (oxic)|
3-Caffeoylquinic acid (chlorogenic acid) polyphenols;Phenolic_acids;Hydroxycinnamic_acids chlorogenic acid cleavage (oxic or anoxic)
Cinnamic acid polyphenols;Phenolic_acids;Hydroxycinnamic_acids trans-cinnamate degradation (oxic)
3,4-Dihydroxyphenylacetic acid polyphenols;Phenolic_acids;Hydroxyphenylacetic_acids homoprotocatechuic acid degradation (oxic)
4-Hydroxyphenylacetic acid polyphenols;Phenolic_acids;Hydroxyphenylacetic_acids 4-hydroxyphenylacetate conversion to homoprotocatechuic acid (oxic)
Phenylacetic acid polyphenols;Phenolic_acids;Hydroxyphenylacetic_acids phenylacetate conversion to benzoyl-coa (anoxic)|phenylacteate degradation (oxic)
Dihydrocaffeic acid polyphenols;Phenolic_acids;Hydroxyphenylpropanoic_acids caffeate respiration (anoxic)
3-Phenylpropionic acid polyphenols;Phenolic_acids;Hydroxyphenylpropanoic_acids phenylpropionate degradation (oxic)
Resveratrol polyphenols;Stilbenes;Stilbenes resveratrol conversion to hydroxybenzaldehydes (oxic)