diff --git a/.github/workflows/ci.yml b/.github/workflows/ci.yml
new file mode 100644
index 0000000..726df50
--- /dev/null
+++ b/.github/workflows/ci.yml
@@ -0,0 +1,74 @@
+name: CI
+
+on:
+  pull_request:
+
+jobs:
+  linux-64:
+    runs-on: ubuntu-latest
+    strategy:
+      fail-fast: false
+
+    steps:
+      - name: Checkout pull request branch
+        uses: actions/checkout@v4
+        with:
+          fetch-depth: 0
+
+      - name: Setup pixi
+        uses: prefix-dev/setup-pixi@v0.8.3
+        with:
+          run-install: false
+
+      - name: Run setup script
+        shell: pixi exec --spec sed -- bash -e {0}
+        run: |
+          sed -i "s?main?${{ github.event.pull_request.head.ref }}?g" pixi-setup.sh
+          sed -i "s?init.sh | bash?init.sh | sed 's,main,${{ github.event.pull_request.head.ref }},g' | bash?" pixi-setup.sh
+          ./pixi-setup.sh
+
+  osx-64:
+    runs-on: macos-13
+    strategy:
+      fail-fast: false
+
+    steps:
+      - name: Checkout pull request branch
+        uses: actions/checkout@v4
+        with:
+          fetch-depth: 0
+
+      - name: Setup pixi
+        uses: prefix-dev/setup-pixi@v0.8.3
+        with:
+          run-install: false
+
+      - name: Run setup script
+        shell: pixi exec --spec sed -- zsh -e {0}
+        run: |
+          sed -i "s?main?${{ github.event.pull_request.head.ref }}?g" pixi-setup.sh
+          sed -i "s?init.sh | bash?init.sh | sed 's,main,${{ github.event.pull_request.head.ref }},g' | bash?" pixi-setup.sh
+          ./pixi-setup.sh
+
+  osx-arm64:
+    runs-on: macos-14
+    strategy:
+      fail-fast: false
+
+    steps:
+      - name: Checkout pull request branch
+        uses: actions/checkout@v4
+        with:
+          fetch-depth: 0
+
+      - name: Setup pixi
+        uses: prefix-dev/setup-pixi@v0.8.3
+        with:
+          run-install: false
+
+      - name: Run setup script
+        shell: pixi exec --spec sed -- zsh -e {0}
+        run: |
+          sed -i "s?main?${{ github.event.pull_request.head.ref }}?g" pixi-setup.sh
+          sed -i "s?init.sh | bash?init.sh | sed 's,main,${{ github.event.pull_request.head.ref }},g' | bash?" pixi-setup.sh
+          ./pixi-setup.sh
diff --git a/.github/workflows/dispatch_ci.yml b/.github/workflows/dispatch_ci.yml
new file mode 100644
index 0000000..6f8db5a
--- /dev/null
+++ b/.github/workflows/dispatch_ci.yml
@@ -0,0 +1,74 @@
+name: Dispatch CI
+
+on:
+  workflow_dispatch:
+
+jobs:
+  linux-64_pixi:
+    runs-on: ubuntu-latest
+    strategy:
+      fail-fast: false
+
+    steps:
+      - name: Checkout pull request branch
+        uses: actions/checkout@v4
+        with:
+          fetch-depth: 0
+
+      - name: Setup pixi
+        uses: prefix-dev/setup-pixi@v0.8.3
+        with:
+          run-install: false
+
+      - name: Run setup script
+        shell: pixi exec --spec sed -- bash -e {0}
+        run: |
+          sed -i "s?main?${{ github.event.pull_request.head.ref }}?g" pixi-setup.sh
+          sed -i "s?init.sh | bash?init.sh | sed 's,main,${{ github.event.pull_request.head.ref }},g' | bash?" pixi-setup.sh
+          ./pixi-setup.sh
+
+  osx-64_pixi:
+    runs-on: macos-latest
+    strategy:
+      fail-fast: false
+
+    steps:
+      - name: Checkout pull request branch
+        uses: actions/checkout@v4
+        with:
+          fetch-depth: 0
+
+      - name: Setup pixi
+        uses: prefix-dev/setup-pixi@v0.8.3
+        with:
+          run-install: false
+
+      - name: Run setup script
+        shell: pixi exec --spec sed -- bash -e {0}
+        run: |
+          sed -i "s?main?${{ github.event.pull_request.head.ref }}?g" pixi-setup.sh
+          sed -i "s?init.sh | bash?init.sh | sed 's,main,${{ github.event.pull_request.head.ref }},g' | bash?" pixi-setup.sh
+          ./pixi-setup.sh
+
+  osx-arm64_pixi:
+    runs-on: macos-14
+    strategy:
+      fail-fast: false
+
+    steps:
+      - name: Checkout pull request branch
+        uses: actions/checkout@v4
+        with:
+          fetch-depth: 0
+
+      - name: Setup pixi
+        uses: prefix-dev/setup-pixi@v0.8.3
+        with:
+          run-install: false
+
+      - name: Run setup script
+        shell: pixi exec --spec sed -- bash -e {0}
+        run: |
+          sed -i "s?main?${{ github.event.pull_request.head.ref }}?g" pixi-setup.sh
+          sed -i "s?init.sh | bash?init.sh | sed 's,main,${{ github.event.pull_request.head.ref }},g' | bash?" pixi-setup.sh
+          ./pixi-setup.sh
diff --git a/configs/jupyter/jupyter_lab_config.py b/configs/jupyter/jupyter_lab_config.py
new file mode 100644
index 0000000..4c6d74d
--- /dev/null
+++ b/configs/jupyter/jupyter_lab_config.py
@@ -0,0 +1,1193 @@
+# Configuration file for lab.
+
+c = get_config()  #noqa
+c.ServerApp.iopub_msg_rate_limit = 5000
+
+#------------------------------------------------------------------------------
+# Application(SingletonConfigurable) configuration
+#------------------------------------------------------------------------------
+## This is an application.
+
+## The date format used by logging formatters for %(asctime)s
+#  Default: '%Y-%m-%d %H:%M:%S'
+# c.Application.log_datefmt = '%Y-%m-%d %H:%M:%S'
+
+## The Logging format template
+#  Default: '[%(name)s]%(highlevel)s %(message)s'
+# c.Application.log_format = '[%(name)s]%(highlevel)s %(message)s'
+
+## Set the log level by value or name.
+#  Choices: any of [0, 10, 20, 30, 40, 50, 'DEBUG', 'INFO', 'WARN', 'ERROR', 'CRITICAL']
+#  Default: 30
+# c.Application.log_level = 30
+
+## Configure additional log handlers.
+#  
+#  The default stderr logs handler is configured by the log_level, log_datefmt
+#  and log_format settings.
+#  
+#  This configuration can be used to configure additional handlers (e.g. to
+#  output the log to a file) or for finer control over the default handlers.
+#  
+#  If provided this should be a logging configuration dictionary, for more
+#  information see:
+#  https://docs.python.org/3/library/logging.config.html#logging-config-
+#  dictschema
+#  
+#  This dictionary is merged with the base logging configuration which defines
+#  the following:
+#  
+#  * A logging formatter intended for interactive use called
+#    ``console``.
+#  * A logging handler that writes to stderr called
+#    ``console`` which uses the formatter ``console``.
+#  * A logger with the name of this application set to ``DEBUG``
+#    level.
+#  
+#  This example adds a new handler that writes to a file:
+#  
+#  .. code-block:: python
+#  
+#     c.Application.logging_config = {
+#         "handlers": {
+#             "file": {
+#                 "class": "logging.FileHandler",
+#                 "level": "DEBUG",
+#                 "filename": "<path/to/file>",
+#             }
+#         },
+#         "loggers": {
+#             "<application-name>": {
+#                 "level": "DEBUG",
+#                 # NOTE: if you don't list the default "console"
+#                 # handler here then it will be disabled
+#                 "handlers": ["console", "file"],
+#             },
+#         },
+#     }
+#  Default: {}
+# c.Application.logging_config = {}
+
+## Instead of starting the Application, dump configuration to stdout
+#  Default: False
+# c.Application.show_config = False
+
+## Instead of starting the Application, dump configuration to stdout (as JSON)
+#  Default: False
+# c.Application.show_config_json = False
+
+#------------------------------------------------------------------------------
+# JupyterApp(Application) configuration
+#------------------------------------------------------------------------------
+## Base class for Jupyter applications
+
+## Answer yes to any prompts.
+#  Default: False
+# c.JupyterApp.answer_yes = False
+
+## Full path of a config file.
+#  Default: ''
+# c.JupyterApp.config_file = ''
+
+## Specify a config file to load.
+#  Default: ''
+# c.JupyterApp.config_file_name = ''
+
+## Generate default config file.
+#  Default: False
+# c.JupyterApp.generate_config = False
+
+## The date format used by logging formatters for %(asctime)s
+#  See also: Application.log_datefmt
+# c.JupyterApp.log_datefmt = '%Y-%m-%d %H:%M:%S'
+
+## The Logging format template
+#  See also: Application.log_format
+# c.JupyterApp.log_format = '[%(name)s]%(highlevel)s %(message)s'
+
+## Set the log level by value or name.
+#  See also: Application.log_level
+# c.JupyterApp.log_level = 30
+
+## 
+#  See also: Application.logging_config
+# c.JupyterApp.logging_config = {}
+
+## Instead of starting the Application, dump configuration to stdout
+#  See also: Application.show_config
+# c.JupyterApp.show_config = False
+
+## Instead of starting the Application, dump configuration to stdout (as JSON)
+#  See also: Application.show_config_json
+# c.JupyterApp.show_config_json = False
+
+#------------------------------------------------------------------------------
+# ExtensionApp(JupyterApp) configuration
+#------------------------------------------------------------------------------
+## Base class for configurable Jupyter Server Extension Applications.
+#  
+#      ExtensionApp subclasses can be initialized two ways:
+#  
+#      - Extension is listed as a jpserver_extension, and ServerApp calls
+#        its load_jupyter_server_extension classmethod. This is the
+#        classic way of loading a server extension.
+#  
+#      - Extension is launched directly by calling its `launch_instance`
+#        class method. This method can be set as a entry_point in
+#        the extensions setup.py.
+
+## Answer yes to any prompts.
+#  See also: JupyterApp.answer_yes
+# c.ExtensionApp.answer_yes = False
+
+## Full path of a config file.
+#  See also: JupyterApp.config_file
+# c.ExtensionApp.config_file = ''
+
+## Specify a config file to load.
+#  See also: JupyterApp.config_file_name
+# c.ExtensionApp.config_file_name = ''
+
+#  Default: ''
+# c.ExtensionApp.default_url = ''
+
+## Generate default config file.
+#  See also: JupyterApp.generate_config
+# c.ExtensionApp.generate_config = False
+
+## Handlers appended to the server.
+#  Default: []
+# c.ExtensionApp.handlers = []
+
+## The date format used by logging formatters for %(asctime)s
+#  See also: Application.log_datefmt
+# c.ExtensionApp.log_datefmt = '%Y-%m-%d %H:%M:%S'
+
+## The Logging format template
+#  See also: Application.log_format
+# c.ExtensionApp.log_format = '[%(name)s]%(highlevel)s %(message)s'
+
+## Set the log level by value or name.
+#  See also: Application.log_level
+# c.ExtensionApp.log_level = 30
+
+## 
+#  See also: Application.logging_config
+# c.ExtensionApp.logging_config = {}
+
+## Whether to open in a browser after starting.
+#          The specific browser used is platform dependent and
+#          determined by the python standard library `webbrowser`
+#          module, unless it is overridden using the --browser
+#          (ServerApp.browser) configuration option.
+#  Default: False
+# c.ExtensionApp.open_browser = False
+
+## Settings that will passed to the server.
+#  Default: {}
+# c.ExtensionApp.settings = {}
+
+## Instead of starting the Application, dump configuration to stdout
+#  See also: Application.show_config
+# c.ExtensionApp.show_config = False
+
+## Instead of starting the Application, dump configuration to stdout (as JSON)
+#  See also: Application.show_config_json
+# c.ExtensionApp.show_config_json = False
+
+## paths to search for serving static files.
+#  
+#          This allows adding javascript/css to be available from the notebook server machine,
+#          or overriding individual files in the IPython
+#  Default: []
+# c.ExtensionApp.static_paths = []
+
+## Url where the static assets for the extension are served.
+#  Default: ''
+# c.ExtensionApp.static_url_prefix = ''
+
+## Paths to search for serving jinja templates.
+#  
+#          Can be used to override templates from notebook.templates.
+#  Default: []
+# c.ExtensionApp.template_paths = []
+
+#------------------------------------------------------------------------------
+# LabServerApp(ExtensionApp) configuration
+#------------------------------------------------------------------------------
+## A Lab Server Application that runs out-of-the-box
+
+## "A list of comma-separated URIs to get the allowed extensions list
+#  
+#  .. versionchanged:: 2.0.0
+#      `LabServerApp.whitetlist_uris` renamed to `allowed_extensions_uris`
+#  Default: ''
+# c.LabServerApp.allowed_extensions_uris = ''
+
+## Answer yes to any prompts.
+#  See also: JupyterApp.answer_yes
+# c.LabServerApp.answer_yes = False
+
+## The application settings directory.
+#  Default: ''
+# c.LabServerApp.app_settings_dir = ''
+
+## The url path for the application.
+#  Default: '/lab'
+# c.LabServerApp.app_url = '/lab'
+
+## Deprecated, use `LabServerApp.blocked_extensions_uris`
+#  Default: ''
+# c.LabServerApp.blacklist_uris = ''
+
+## A list of comma-separated URIs to get the blocked extensions list
+#  
+#  .. versionchanged:: 2.0.0
+#      `LabServerApp.blacklist_uris` renamed to `blocked_extensions_uris`
+#  Default: ''
+# c.LabServerApp.blocked_extensions_uris = ''
+
+## Whether to cache files on the server. This should be `True` except in dev
+#  mode.
+#  Default: True
+# c.LabServerApp.cache_files = True
+
+## Full path of a config file.
+#  See also: JupyterApp.config_file
+# c.LabServerApp.config_file = ''
+
+## Specify a config file to load.
+#  See also: JupyterApp.config_file_name
+# c.LabServerApp.config_file_name = ''
+
+## Whether getting a relative (False) or absolute (True) path when copying a
+#  path.
+#  Default: False
+# c.LabServerApp.copy_absolute_path = False
+
+## Extra paths to look for federated JupyterLab extensions
+#  Default: []
+# import os.path
+# c.LabServerApp.extra_labextensions_path = [os.path.expanduser("~/micromamba/envs/python_libs/share/jupyter/labextensions")]
+
+## Generate default config file.
+#  See also: JupyterApp.generate_config
+# c.LabServerApp.generate_config = False
+
+## Handlers appended to the server.
+#  See also: ExtensionApp.handlers
+# c.LabServerApp.handlers = []
+
+## Options to pass to the jinja2 environment for this
+#  Default: {}
+# c.LabServerApp.jinja2_options = {}
+
+## The standard paths to look in for federated JupyterLab extensions
+#  Default: []
+# c.LabServerApp.labextensions_path = []
+
+## The url for federated JupyterLab extensions
+#  Default: ''
+# c.LabServerApp.labextensions_url = ''
+
+## The interval delay in seconds to refresh the lists
+#  Default: 3600
+# c.LabServerApp.listings_refresh_seconds = 3600
+
+## The optional kwargs to use for the listings HTTP requests             as
+#  described on https://2.python-requests.org/en/v2.7.0/api/#requests.request
+#  Default: {}
+# c.LabServerApp.listings_request_options = {}
+
+## The listings url.
+#  Default: ''
+# c.LabServerApp.listings_url = ''
+
+## The date format used by logging formatters for %(asctime)s
+#  See also: Application.log_datefmt
+# c.LabServerApp.log_datefmt = '%Y-%m-%d %H:%M:%S'
+
+## The Logging format template
+#  See also: Application.log_format
+# c.LabServerApp.log_format = '[%(name)s]%(highlevel)s %(message)s'
+
+## Set the log level by value or name.
+#  See also: Application.log_level
+# c.LabServerApp.log_level = 30
+
+## 
+#  See also: Application.logging_config
+# c.LabServerApp.logging_config = {}
+
+## Whether a notebook should start a kernel automatically.
+#  Default: True
+# c.LabServerApp.notebook_starts_kernel = True
+
+## Whether to open in a browser after starting.
+#  See also: ExtensionApp.open_browser
+# c.LabServerApp.open_browser = False
+
+## The optional location of the settings schemas directory. If given, a handler
+#  will be added for settings.
+#  Default: ''
+# c.LabServerApp.schemas_dir = ''
+
+## Settings that will passed to the server.
+#  See also: ExtensionApp.settings
+# c.LabServerApp.settings = {}
+
+## The url path of the settings handler.
+#  Default: ''
+# c.LabServerApp.settings_url = ''
+
+## Instead of starting the Application, dump configuration to stdout
+#  See also: Application.show_config
+# c.LabServerApp.show_config = False
+
+## Instead of starting the Application, dump configuration to stdout (as JSON)
+#  See also: Application.show_config_json
+# c.LabServerApp.show_config_json = False
+
+## The optional location of local static files. If given, a static file handler
+#  will be added.
+#  Default: ''
+# c.LabServerApp.static_dir = ''
+
+## paths to search for serving static files.
+#  See also: ExtensionApp.static_paths
+# c.LabServerApp.static_paths = []
+
+## Url where the static assets for the extension are served.
+#  See also: ExtensionApp.static_url_prefix
+# c.LabServerApp.static_url_prefix = ''
+
+## Paths to search for serving jinja templates.
+#  See also: ExtensionApp.template_paths
+# c.LabServerApp.template_paths = []
+
+## The application templates directory.
+#  Default: ''
+# c.LabServerApp.templates_dir = ''
+
+## The optional location of the themes directory. If given, a handler will be
+#  added for themes.
+#  Default: ''
+# c.LabServerApp.themes_dir = ''
+
+## The theme url.
+#  Default: ''
+# c.LabServerApp.themes_url = ''
+
+## The url path of the translations handler.
+#  Default: ''
+# c.LabServerApp.translations_api_url = ''
+
+## The url path of the tree handler.
+#  Default: ''
+# c.LabServerApp.tree_url = ''
+
+## The optional location of the user settings directory.
+#  Default: ''
+# c.LabServerApp.user_settings_dir = ''
+
+## Deprecated, use `LabServerApp.allowed_extensions_uris`
+#  Default: ''
+# c.LabServerApp.whitelist_uris = ''
+
+## The url path of the workspaces API.
+#  Default: ''
+# c.LabServerApp.workspaces_api_url = ''
+
+## The optional location of the saved workspaces directory. If given, a handler
+#  will be added for workspaces.
+#  Default: ''
+# c.LabServerApp.workspaces_dir = ''
+
+#------------------------------------------------------------------------------
+# LabApp(LabServerApp) configuration
+#------------------------------------------------------------------------------
+## 
+#  See also: LabServerApp.allowed_extensions_uris
+# c.LabApp.allowed_extensions_uris = ''
+
+## Answer yes to any prompts.
+#  See also: JupyterApp.answer_yes
+# c.LabApp.answer_yes = False
+
+## The app directory to launch JupyterLab from.
+#  Default: None
+# c.LabApp.app_dir = None
+
+## The application settings directory.
+#  Default: ''
+# c.LabApp.app_settings_dir = ''
+
+## The url path for the application.
+#  Default: '/lab'
+# c.LabApp.app_url = '/lab'
+
+## Deprecated, use `LabServerApp.blocked_extensions_uris`
+#  See also: LabServerApp.blacklist_uris
+# c.LabApp.blacklist_uris = ''
+
+## 
+#  See also: LabServerApp.blocked_extensions_uris
+# c.LabApp.blocked_extensions_uris = ''
+
+## Whether to cache files on the server. This should be `True` except in dev
+#  mode.
+#  Default: True
+# c.LabApp.cache_files = True
+
+## A callable class that receives the current version at instantiation and
+#  calling it must return asynchronously a string indicating which version is
+#  available and how to install or None if no update is available. The string
+#  supports Markdown format.
+#  Default: 'jupyterlab.handlers.announcements.CheckForUpdate'
+# c.LabApp.check_for_updates_class = 'jupyterlab.handlers.announcements.CheckForUpdate'
+
+## To enable real-time collaboration, you must install the extension `jupyter_collaboration`.
+#          You can install it using pip for example:
+#  
+#              python -m pip install jupyter_collaboration
+#  
+#          This flag is now deprecated and will be removed in JupyterLab v5.
+#  Default: False
+# c.LabApp.collaborative = False
+
+## Full path of a config file.
+#  See also: JupyterApp.config_file
+# c.LabApp.config_file = ''
+
+## Specify a config file to load.
+#  See also: JupyterApp.config_file_name
+# c.LabApp.config_file_name = ''
+
+## Whether getting a relative (False) or absolute (True) path when copying a
+#  path.
+#  Default: False
+# c.LabApp.copy_absolute_path = False
+
+## Whether to start the app in core mode. In this mode, JupyterLab
+#          will run using the JavaScript assets that are within the installed
+#          JupyterLab Python package. In core mode, third party extensions are disabled.
+#          The `--dev-mode` flag is an alias to this to be used when the Python package
+#          itself is installed in development mode (`pip install -e .`).
+#  Default: False
+# c.LabApp.core_mode = False
+
+## Whether custom CSS is loaded on the page.
+#      Defaults to False.
+#  Default: False
+# c.LabApp.custom_css = False
+
+## The default URL to redirect to from `/`
+#  Default: '/lab'
+# c.LabApp.default_url = '/lab'
+
+## Whether to start the app in dev mode. Uses the unpublished local
+#          JavaScript packages in the `dev_mode` folder.  In this case JupyterLab will
+#          show a red stripe at the top of the page.  It can only be used if JupyterLab
+#          is installed as `pip install -e .`.
+#  Default: False
+# c.LabApp.dev_mode = False
+
+## Whether to expose the global app instance to browser via window.jupyterapp
+#  Default: False
+# c.LabApp.expose_app_in_browser = False
+
+## The extension manager factory to use. The default options are:
+#          "readonly" for a manager without installation capability or "pypi" for
+#          a manager using PyPi.org and pip to install extensions.
+#  Default: 'pypi'
+# c.LabApp.extension_manager = 'pypi'
+
+## Whether to load prebuilt extensions in dev mode. This may be
+#          useful to run and test prebuilt extensions in development installs of
+#          JupyterLab. APIs in a JupyterLab development install may be
+#          incompatible with published packages, so prebuilt extensions compiled
+#          against published packages may not work correctly.
+#  Default: False
+# c.LabApp.extensions_in_dev_mode = False
+
+## Extra paths to look for federated JupyterLab extensions
+#  Default: []
+# c.LabApp.extra_labextensions_path = []
+
+## Generate default config file.
+#  See also: JupyterApp.generate_config
+# c.LabApp.generate_config = False
+
+## Handlers appended to the server.
+#  See also: ExtensionApp.handlers
+# c.LabApp.handlers = []
+
+## Options to pass to the jinja2 environment for this
+#  Default: {}
+# c.LabApp.jinja2_options = {}
+
+## The standard paths to look in for federated JupyterLab extensions
+#  Default: []
+# c.LabApp.labextensions_path = []
+
+## The url for federated JupyterLab extensions
+#  Default: ''
+# c.LabApp.labextensions_url = ''
+
+## The interval delay in seconds to refresh the lists
+#  See also: LabServerApp.listings_refresh_seconds
+# c.LabApp.listings_refresh_seconds = 3600
+
+## The optional kwargs to use for the listings HTTP requests             as
+#  described on https://2.python-requests.org/en/v2.7.0/api/#requests.request
+#  See also: LabServerApp.listings_request_options
+# c.LabApp.listings_request_options = {}
+
+## The listings url.
+#  Default: ''
+# c.LabApp.listings_url = ''
+
+## Whether all plugins are locked (cannot be enabled/disabled from the UI)
+#  Default: False
+# c.LabApp.lock_all_plugins = False
+
+## The date format used by logging formatters for %(asctime)s
+#  See also: Application.log_datefmt
+# c.LabApp.log_datefmt = '%Y-%m-%d %H:%M:%S'
+
+## The Logging format template
+#  See also: Application.log_format
+# c.LabApp.log_format = '[%(name)s]%(highlevel)s %(message)s'
+
+## Set the log level by value or name.
+#  See also: Application.log_level
+# c.LabApp.log_level = 30
+
+## 
+#  See also: Application.logging_config
+# c.LabApp.logging_config = {}
+
+## URL that serves news Atom feed; by default the JupyterLab organization
+#  announcements will be fetched. Set to None to turn off fetching announcements.
+#  Default: 'https://jupyterlab.github.io/assets/feed.xml'
+# c.LabApp.news_url = 'https://jupyterlab.github.io/assets/feed.xml'
+
+## Whether a notebook should start a kernel automatically.
+#  Default: True
+# c.LabApp.notebook_starts_kernel = True
+
+## Whether to open in a browser after starting.
+#  See also: ExtensionApp.open_browser
+# c.LabApp.open_browser = False
+
+## The override url for static lab assets, typically a CDN.
+#  Default: ''
+# c.LabApp.override_static_url = ''
+
+## The override url for static lab theme assets, typically a CDN.
+#  Default: ''
+# c.LabApp.override_theme_url = ''
+
+## The optional location of the settings schemas directory. If given, a handler
+#  will be added for settings.
+#  Default: ''
+# c.LabApp.schemas_dir = ''
+
+## Settings that will passed to the server.
+#  See also: ExtensionApp.settings
+# c.LabApp.settings = {}
+
+## The url path of the settings handler.
+#  Default: ''
+# c.LabApp.settings_url = ''
+
+## Instead of starting the Application, dump configuration to stdout
+#  See also: Application.show_config
+# c.LabApp.show_config = False
+
+## Instead of starting the Application, dump configuration to stdout (as JSON)
+#  See also: Application.show_config_json
+# c.LabApp.show_config_json = False
+
+## Whether to skip the initial install and JS build of the app in dev mode
+#  Default: False
+# c.LabApp.skip_dev_build = False
+
+## Splice source packages into app directory.
+#  Default: False
+# c.LabApp.splice_source = False
+
+## The optional location of local static files. If given, a static file handler
+#  will be added.
+#  Default: ''
+# c.LabApp.static_dir = ''
+
+## paths to search for serving static files.
+#  See also: ExtensionApp.static_paths
+# c.LabApp.static_paths = []
+
+## Url where the static assets for the extension are served.
+#  See also: ExtensionApp.static_url_prefix
+# c.LabApp.static_url_prefix = ''
+
+## Paths to search for serving jinja templates.
+#  See also: ExtensionApp.template_paths
+# c.LabApp.template_paths = []
+
+## The application templates directory.
+#  Default: ''
+# c.LabApp.templates_dir = ''
+
+## The optional location of the themes directory. If given, a handler will be
+#  added for themes.
+#  Default: ''
+# c.LabApp.themes_dir = ''
+
+## The theme url.
+#  Default: ''
+# c.LabApp.themes_url = ''
+
+## The url path of the translations handler.
+#  Default: ''
+# c.LabApp.translations_api_url = ''
+
+## The url path of the tree handler.
+#  Default: ''
+# c.LabApp.tree_url = ''
+
+## The directory for user settings.
+#  Default: '/Users/dnachun/.jupyter/lab/user-settings'
+# c.LabApp.user_settings_dir = '/Users/dnachun/.jupyter/lab/user-settings'
+
+## Whether to serve the app in watch mode
+#  Default: False
+# c.LabApp.watch = False
+
+## Deprecated, use `LabServerApp.allowed_extensions_uris`
+#  See also: LabServerApp.whitelist_uris
+# c.LabApp.whitelist_uris = ''
+
+## The url path of the workspaces API.
+#  Default: ''
+# c.LabApp.workspaces_api_url = ''
+
+## The directory for workspaces
+#  Default: '/Users/dnachun/.jupyter/lab/workspaces'
+# c.LabApp.workspaces_dir = '/Users/dnachun/.jupyter/lab/workspaces'
+
+#------------------------------------------------------------------------------
+# ServerApp(JupyterApp) configuration
+#------------------------------------------------------------------------------
+## The Jupyter Server application class.
+
+## Set the Access-Control-Allow-Credentials: true header
+#  Default: False
+# c.ServerApp.allow_credentials = False
+
+## Whether or not to allow external kernels, whose connection files are placed in
+#  external_connection_dir.
+#  Default: False
+# c.ServerApp.allow_external_kernels = False
+
+## Set the Access-Control-Allow-Origin header
+#  
+#          Use '*' to allow any origin to access your server.
+#  
+#          Takes precedence over allow_origin_pat.
+#  Default: ''
+# c.ServerApp.allow_origin = ''
+
+## Use a regular expression for the Access-Control-Allow-Origin header
+#  
+#          Requests from an origin matching the expression will get replies with:
+#  
+#              Access-Control-Allow-Origin: origin
+#  
+#          where `origin` is the origin of the request.
+#  
+#          Ignored if allow_origin is set.
+#  Default: ''
+# c.ServerApp.allow_origin_pat = ''
+
+## DEPRECATED in 2.0. Use PasswordIdentityProvider.allow_password_change
+#  Default: True
+# c.ServerApp.allow_password_change = True
+
+## Allow requests where the Host header doesn't point to a local server
+#  
+#         By default, requests get a 403 forbidden response if the 'Host' header
+#         shows that the browser thinks it's on a non-local domain.
+#         Setting this option to True disables this check.
+#  
+#         This protects against 'DNS rebinding' attacks, where a remote web server
+#         serves you a page and then changes its DNS to send later requests to a
+#         local IP, bypassing same-origin checks.
+#  
+#         Local IP addresses (such as 127.0.0.1 and ::1) are allowed as local,
+#         along with hostnames configured in local_hostnames.
+#  Default: False
+# c.ServerApp.allow_remote_access = False
+
+## Whether to allow the user to run the server as root.
+#  Default: False
+c.ServerApp.allow_root = True
+
+## Allow unauthenticated access to endpoints without authentication rule.
+#  
+#          When set to `True` (default in jupyter-server 2.0, subject to change
+#          in the future), any request to an endpoint without an authentication rule
+#          (either `@tornado.web.authenticated`, or `@allow_unauthenticated`)
+#          will be permitted, regardless of whether user has logged in or not.
+#  
+#          When set to `False`, logging in will be required for access to each endpoint,
+#          excluding the endpoints marked with `@allow_unauthenticated` decorator.
+#  
+#          This option can be configured using `JUPYTER_SERVER_ALLOW_UNAUTHENTICATED_ACCESS`
+#          environment variable: any non-empty value other than "true" and "yes" will
+#          prevent unauthenticated access to endpoints without `@allow_unauthenticated`.
+#  Default: True
+# c.ServerApp.allow_unauthenticated_access = True
+
+## Answer yes to any prompts.
+#  See also: JupyterApp.answer_yes
+# c.ServerApp.answer_yes = False
+
+## "
+#          Require authentication to access prometheus metrics.
+#  Default: True
+# c.ServerApp.authenticate_prometheus = True
+
+## The authorizer class to use.
+#  Default: 'jupyter_server.auth.authorizer.AllowAllAuthorizer'
+# c.ServerApp.authorizer_class = 'jupyter_server.auth.authorizer.AllowAllAuthorizer'
+
+## Reload the webapp when changes are made to any Python src files.
+#  Default: False
+# c.ServerApp.autoreload = False
+
+## The base URL for the Jupyter server.
+#  
+#                         Leading and trailing slashes can be omitted,
+#                         and will automatically be added.
+#  Default: '/'
+# c.ServerApp.base_url = '/'
+
+## Specify what command to use to invoke a web
+#                        browser when starting the server. If not specified, the
+#                        default browser will be determined by the `webbrowser`
+#                        standard library module, which allows setting of the
+#                        BROWSER environment variable to override it.
+#  Default: ''
+# c.ServerApp.browser = ''
+
+## The full path to an SSL/TLS certificate file.
+#  Default: ''
+# c.ServerApp.certfile = ''
+
+## The full path to a certificate authority certificate for SSL/TLS client
+#  authentication.
+#  Default: ''
+# c.ServerApp.client_ca = ''
+
+## Full path of a config file.
+#  See also: JupyterApp.config_file
+# c.ServerApp.config_file = ''
+
+## Specify a config file to load.
+#  See also: JupyterApp.config_file_name
+# c.ServerApp.config_file_name = ''
+
+## The config manager class to use
+#  Default: 'jupyter_server.services.config.manager.ConfigManager'
+# c.ServerApp.config_manager_class = 'jupyter_server.services.config.manager.ConfigManager'
+
+## The content manager class to use.
+#  Default: 'jupyter_server.services.contents.largefilemanager.AsyncLargeFileManager'
+# c.ServerApp.contents_manager_class = 'jupyter_server.services.contents.largefilemanager.AsyncLargeFileManager'
+
+## DEPRECATED. Use IdentityProvider.cookie_options
+#  Default: {}
+# c.ServerApp.cookie_options = {}
+
+## The random bytes used to secure cookies.
+#          By default this is a new random number every time you start the server.
+#          Set it to a value in a config file to enable logins to persist across server sessions.
+#  
+#          Note: Cookie secrets should be kept private, do not share config files with
+#          cookie_secret stored in plaintext (you can read the value from a file).
+#  Default: b''
+# c.ServerApp.cookie_secret = b''
+
+## The file where the cookie secret is stored.
+#  Default: ''
+# c.ServerApp.cookie_secret_file = ''
+
+## Override URL shown to users.
+#  
+#          Replace actual URL, including protocol, address, port and base URL,
+#          with the given value when displaying URL to the users. Do not change
+#          the actual connection URL. If authentication token is enabled, the
+#          token is added to the custom URL automatically.
+#  
+#          This option is intended to be used when the URL to display to the user
+#          cannot be determined reliably by the Jupyter server (proxified
+#          or containerized setups for example).
+#  Default: ''
+# c.ServerApp.custom_display_url = ''
+
+## The default URL to redirect to from `/`
+#  Default: '/'
+# c.ServerApp.default_url = '/'
+
+## Disable cross-site-request-forgery protection
+#  
+#          Jupyter server includes protection from cross-site request forgeries,
+#          requiring API requests to either:
+#  
+#          - originate from pages served by this server (validated with XSRF cookie and token), or
+#          - authenticate with a token
+#  
+#          Some anonymous compute resources still desire the ability to run code,
+#          completely without authentication.
+#          These services can disable all authentication and security checks,
+#          with the full knowledge of what that implies.
+#  Default: False
+# c.ServerApp.disable_check_xsrf = False
+
+## The directory to look at for external kernel connection files, if
+#  allow_external_kernels is True. Defaults to Jupyter
+#  runtime_dir/external_kernels. Make sure that this directory is not filled with
+#  left-over connection files, that could result in unnecessary kernel manager
+#  creations.
+#  Default: None
+# c.ServerApp.external_connection_dir = None
+
+## handlers that should be loaded at higher priority than the default services
+#  Default: []
+# c.ServerApp.extra_services = []
+
+## Extra paths to search for serving static files.
+#  
+#          This allows adding javascript/css to be available from the Jupyter server machine,
+#          or overriding individual files in the IPython
+#  Default: []
+# c.ServerApp.extra_static_paths = []
+
+## Extra paths to search for serving jinja templates.
+#  
+#          Can be used to override templates from jupyter_server.templates.
+#  Default: []
+# c.ServerApp.extra_template_paths = []
+
+## Open the named file when the application is launched.
+#  Default: ''
+# c.ServerApp.file_to_run = ''
+
+## The URL prefix where files are opened directly.
+#  Default: 'notebooks'
+# c.ServerApp.file_url_prefix = 'notebooks'
+
+## Generate default config file.
+#  See also: JupyterApp.generate_config
+# c.ServerApp.generate_config = False
+
+## DEPRECATED. Use IdentityProvider.get_secure_cookie_kwargs
+#  Default: {}
+# c.ServerApp.get_secure_cookie_kwargs = {}
+
+## The identity provider class to use.
+#  Default: 'jupyter_server.auth.identity.PasswordIdentityProvider'
+# c.ServerApp.identity_provider_class = 'jupyter_server.auth.identity.PasswordIdentityProvider'
+
+## DEPRECATED. Use ZMQChannelsWebsocketConnection.iopub_data_rate_limit
+#  Default: 0.0
+# c.ServerApp.iopub_data_rate_limit = 0.0
+
+## DEPRECATED. Use ZMQChannelsWebsocketConnection.iopub_msg_rate_limit
+#  Default: 0.0
+# c.ServerApp.iopub_msg_rate_limit = 0.0
+
+## The IP address the Jupyter server will listen on.
+#  Default: 'localhost'
+c.ServerApp.ip = '0.0.0.0'
+
+## Supply extra arguments that will be passed to Jinja environment.
+#  Default: {}
+# c.ServerApp.jinja_environment_options = {}
+
+## Extra variables to supply to jinja templates when rendering.
+#  Default: {}
+# c.ServerApp.jinja_template_vars = {}
+
+## Dict of Python modules to load as Jupyter server extensions.Entry values can
+#  be used to enable and disable the loading ofthe extensions. The extensions
+#  will be loaded in alphabetical order.
+#  Default: {}
+c.ServerApp.jpserver_extensions = {"ipyparallel": True}
+
+## The kernel manager class to use.
+#  Default: 'jupyter_server.services.kernels.kernelmanager.MappingKernelManager'
+# c.ServerApp.kernel_manager_class = 'jupyter_server.services.kernels.kernelmanager.MappingKernelManager'
+
+## The kernel spec manager class to use. Should be a subclass of
+#  `jupyter_client.kernelspec.KernelSpecManager`.
+#  
+#  The Api of KernelSpecManager is provisional and might change without warning
+#  between this version of Jupyter and the next stable one.
+#  Default: 'builtins.object'
+# c.ServerApp.kernel_spec_manager_class = 'builtins.object'
+
+## The kernel websocket connection class to use.
+#  Default: 'jupyter_server.services.kernels.connection.base.BaseKernelWebsocketConnection'
+# c.ServerApp.kernel_websocket_connection_class = 'jupyter_server.services.kernels.connection.base.BaseKernelWebsocketConnection'
+
+## DEPRECATED. Use ZMQChannelsWebsocketConnection.kernel_ws_protocol
+#  Default: ''
+# c.ServerApp.kernel_ws_protocol = ''
+
+## The full path to a private key file for usage with SSL/TLS.
+#  Default: ''
+# c.ServerApp.keyfile = ''
+
+## DEPRECATED. Use ZMQChannelsWebsocketConnection.limit_rate
+#  Default: False
+# c.ServerApp.limit_rate = False
+
+## Hostnames to allow as local when allow_remote_access is False.
+#  
+#         Local IP addresses (such as 127.0.0.1 and ::1) are automatically accepted
+#         as local as well.
+#  Default: ['localhost']
+# c.ServerApp.local_hostnames = ['localhost']
+
+## The date format used by logging formatters for %(asctime)s
+#  See also: Application.log_datefmt
+# c.ServerApp.log_datefmt = '%Y-%m-%d %H:%M:%S'
+
+## The Logging format template
+#  See also: Application.log_format
+# c.ServerApp.log_format = '[%(name)s]%(highlevel)s %(message)s'
+
+## Set the log level by value or name.
+#  See also: Application.log_level
+# c.ServerApp.log_level = 30
+
+## 
+#  See also: Application.logging_config
+# c.ServerApp.logging_config = {}
+
+## The login handler class to use.
+#  Default: 'jupyter_server.auth.login.LegacyLoginHandler'
+# c.ServerApp.login_handler_class = 'jupyter_server.auth.login.LegacyLoginHandler'
+
+## The logout handler class to use.
+#  Default: 'jupyter_server.auth.logout.LogoutHandler'
+# c.ServerApp.logout_handler_class = 'jupyter_server.auth.logout.LogoutHandler'
+
+## Sets the maximum allowed size of the client request body, specified in the
+#  Content-Length request header field. If the size in a request exceeds the
+#  configured value, a malformed HTTP message is returned to the client.
+#  
+#  Note: max_body_size is applied even in streaming mode.
+#  Default: 536870912
+# c.ServerApp.max_body_size = 536870912
+
+## Gets or sets the maximum amount of memory, in bytes, that is allocated for use
+#  by the buffer manager.
+#  Default: 536870912
+# c.ServerApp.max_buffer_size = 536870912
+
+## Gets or sets a lower bound on the open file handles process resource limit.
+#  This may need to be increased if you run into an OSError: [Errno 24] Too many
+#  open files. This is not applicable when running on Windows.
+#  Default: 0
+# c.ServerApp.min_open_files_limit = 0
+
+## DEPRECATED, use root_dir.
+#  Default: ''
+# c.ServerApp.notebook_dir = ''
+
+## Whether to open in a browser after starting.
+#                          The specific browser used is platform dependent and
+#                          determined by the python standard library `webbrowser`
+#                          module, unless it is overridden using the --browser
+#                          (ServerApp.browser) configuration option.
+#  Default: False
+# c.ServerApp.open_browser = False
+
+## DEPRECATED in 2.0. Use PasswordIdentityProvider.hashed_password
+#  Default: ''
+# c.ServerApp.password = ''
+
+## DEPRECATED in 2.0. Use PasswordIdentityProvider.password_required
+#  Default: False
+# c.ServerApp.password_required = False
+
+## The port the server will listen on (env: JUPYTER_PORT).
+#  Default: 0
+# c.ServerApp.port = 0
+
+## The number of additional ports to try if the specified port is not available
+#  (env: JUPYTER_PORT_RETRIES).
+#  Default: 50
+# c.ServerApp.port_retries = 50
+
+## Preferred starting directory to use for notebooks and kernels.
+#  ServerApp.preferred_dir is deprecated in jupyter-server 2.0. Use
+#  FileContentsManager.preferred_dir instead
+#  Default: ''
+# c.ServerApp.preferred_dir = ''
+
+## DISABLED: use %pylab or %matplotlib in the notebook to enable matplotlib.
+#  Default: 'disabled'
+# c.ServerApp.pylab = 'disabled'
+
+## If True, display controls to shut down the Jupyter server, such as menu items
+#  or buttons.
+#  Default: True
+# c.ServerApp.quit_button = True
+
+## DEPRECATED. Use ZMQChannelsWebsocketConnection.rate_limit_window
+#  Default: 0.0
+# c.ServerApp.rate_limit_window = 0.0
+
+## Reraise exceptions encountered loading server extensions?
+#  Default: False
+# c.ServerApp.reraise_server_extension_failures = False
+
+## The directory to use for notebooks and kernels.
+#  Default: ''
+# c.ServerApp.root_dir = ''
+
+## The session manager class to use.
+#  Default: 'builtins.object'
+# c.ServerApp.session_manager_class = 'builtins.object'
+
+## Instead of starting the Application, dump configuration to stdout
+#  See also: Application.show_config
+# c.ServerApp.show_config = False
+
+## Instead of starting the Application, dump configuration to stdout (as JSON)
+#  See also: Application.show_config_json
+# c.ServerApp.show_config_json = False
+
+## Shut down the server after N seconds with no kernelsrunning and no activity.
+#  This can be used together with culling idle kernels
+#  (MappingKernelManager.cull_idle_timeout) to shutdown the Jupyter server when
+#  it's not in use. This is not precisely timed: it may shut down up to a minute
+#  later. 0 (the default) disables this automatic shutdown.
+#  Default: 0
+# c.ServerApp.shutdown_no_activity_timeout = 0
+
+## The UNIX socket the Jupyter server will listen on.
+#  Default: ''
+# c.ServerApp.sock = ''
+
+## The permissions mode for UNIX socket creation (default: 0600).
+#  Default: '0600'
+# c.ServerApp.sock_mode = '0600'
+
+## Supply SSL options for the tornado HTTPServer.
+#              See the tornado docs for details.
+#  Default: {}
+# c.ServerApp.ssl_options = {}
+
+## Paths to set up static files as immutable.
+#  
+#  This allow setting up the cache control of static files as immutable. It
+#  should be used for static file named with a hash for instance.
+#  Default: []
+# c.ServerApp.static_immutable_cache = []
+
+## Supply overrides for terminado. Currently only supports "shell_command".
+#  Default: {}
+# c.ServerApp.terminado_settings = {}
+
+## Set to False to disable terminals.
+#  
+#           This does *not* make the server more secure by itself.
+#           Anything the user can in a terminal, they can also do in a notebook.
+#  
+#           Terminals may also be automatically disabled if the terminado package
+#           is not available.
+#  Default: False
+# c.ServerApp.terminals_enabled = False
+
+## DEPRECATED. Use IdentityProvider.token
+#  Default: '<DEPRECATED>'
+# c.ServerApp.token = '<DEPRECATED>'
+
+## Supply overrides for the tornado.web.Application that the Jupyter server uses.
+#  Default: {}
+# c.ServerApp.tornado_settings = {}
+
+## Whether to trust or not X-Scheme/X-Forwarded-Proto and X-Real-Ip/X-Forwarded-
+#  For headerssent by the upstream reverse proxy. Necessary if the proxy handles
+#  SSL
+#  Default: False
+# c.ServerApp.trust_xheaders = False
+
+## Disable launching browser by redirect file
+#       For versions of notebook > 5.7.2, a security feature measure was added that
+#       prevented the authentication token used to launch the browser from being visible.
+#       This feature makes it difficult for other users on a multi-user system from
+#       running code in your Jupyter session as you.
+#       However, some environments (like Windows Subsystem for Linux (WSL) and Chromebooks),
+#       launching a browser using a redirect file can lead the browser failing to load.
+#       This is because of the difference in file structures/paths between the runtime and
+#       the browser.
+#  
+#       Disabling this setting to False will disable this behavior, allowing the browser
+#       to launch by using a URL and visible token (as before).
+#  Default: True
+# c.ServerApp.use_redirect_file = True
+
+## Specify where to open the server on startup. This is the
+#          `new` argument passed to the standard library method `webbrowser.open`.
+#          The behaviour is not guaranteed, but depends on browser support. Valid
+#          values are:
+#  
+#           - 2 opens a new tab,
+#           - 1 opens a new window,
+#           - 0 opens in an existing window.
+#  
+#          See the `webbrowser.open` documentation for details.
+#  Default: 2
+# c.ServerApp.webbrowser_open_new = 2
+
+## Set the tornado compression options for websocket connections.
+#  
+#  This value will be returned from
+#  :meth:`WebSocketHandler.get_compression_options`. None (default) will disable
+#  compression. A dict (even an empty one) will enable compression.
+#  
+#  See the tornado docs for WebSocketHandler.get_compression_options for details.
+#  Default: None
+# c.ServerApp.websocket_compression_options = None
+
+## Configure the websocket ping interval in seconds.
+#  
+#  Websockets are long-lived connections that are used by some Jupyter Server
+#  extensions.
+#  
+#  Periodic pings help to detect disconnected clients and keep the connection
+#  active. If this is set to None, then no pings will be performed.
+#  
+#  When a ping is sent, the client has ``websocket_ping_timeout`` seconds to
+#  respond. If no response is received within this period, the connection will be
+#  closed from the server side.
+#  Default: 0
+# c.ServerApp.websocket_ping_interval = 0
+
+## Configure the websocket ping timeout in seconds.
+#  
+#  See ``websocket_ping_interval`` for details.
+#  Default: 0
+# c.ServerApp.websocket_ping_timeout = 0
+
+## The base URL for websockets,
+#          if it differs from the HTTP server (hint: it almost certainly doesn't).
+#  
+#          Should be in the form of an HTTP origin: ws[s]://hostname[:port]
+#  Default: ''
+# c.ServerApp.websocket_url = ''
diff --git a/configs/jupyter/jupyter_server_config.py b/configs/jupyter/jupyter_server_config.py
new file mode 100644
index 0000000..4c6d74d
--- /dev/null
+++ b/configs/jupyter/jupyter_server_config.py
@@ -0,0 +1,1193 @@
+# Configuration file for lab.
+
+c = get_config()  #noqa
+c.ServerApp.iopub_msg_rate_limit = 5000
+
+#------------------------------------------------------------------------------
+# Application(SingletonConfigurable) configuration
+#------------------------------------------------------------------------------
+## This is an application.
+
+## The date format used by logging formatters for %(asctime)s
+#  Default: '%Y-%m-%d %H:%M:%S'
+# c.Application.log_datefmt = '%Y-%m-%d %H:%M:%S'
+
+## The Logging format template
+#  Default: '[%(name)s]%(highlevel)s %(message)s'
+# c.Application.log_format = '[%(name)s]%(highlevel)s %(message)s'
+
+## Set the log level by value or name.
+#  Choices: any of [0, 10, 20, 30, 40, 50, 'DEBUG', 'INFO', 'WARN', 'ERROR', 'CRITICAL']
+#  Default: 30
+# c.Application.log_level = 30
+
+## Configure additional log handlers.
+#  
+#  The default stderr logs handler is configured by the log_level, log_datefmt
+#  and log_format settings.
+#  
+#  This configuration can be used to configure additional handlers (e.g. to
+#  output the log to a file) or for finer control over the default handlers.
+#  
+#  If provided this should be a logging configuration dictionary, for more
+#  information see:
+#  https://docs.python.org/3/library/logging.config.html#logging-config-
+#  dictschema
+#  
+#  This dictionary is merged with the base logging configuration which defines
+#  the following:
+#  
+#  * A logging formatter intended for interactive use called
+#    ``console``.
+#  * A logging handler that writes to stderr called
+#    ``console`` which uses the formatter ``console``.
+#  * A logger with the name of this application set to ``DEBUG``
+#    level.
+#  
+#  This example adds a new handler that writes to a file:
+#  
+#  .. code-block:: python
+#  
+#     c.Application.logging_config = {
+#         "handlers": {
+#             "file": {
+#                 "class": "logging.FileHandler",
+#                 "level": "DEBUG",
+#                 "filename": "<path/to/file>",
+#             }
+#         },
+#         "loggers": {
+#             "<application-name>": {
+#                 "level": "DEBUG",
+#                 # NOTE: if you don't list the default "console"
+#                 # handler here then it will be disabled
+#                 "handlers": ["console", "file"],
+#             },
+#         },
+#     }
+#  Default: {}
+# c.Application.logging_config = {}
+
+## Instead of starting the Application, dump configuration to stdout
+#  Default: False
+# c.Application.show_config = False
+
+## Instead of starting the Application, dump configuration to stdout (as JSON)
+#  Default: False
+# c.Application.show_config_json = False
+
+#------------------------------------------------------------------------------
+# JupyterApp(Application) configuration
+#------------------------------------------------------------------------------
+## Base class for Jupyter applications
+
+## Answer yes to any prompts.
+#  Default: False
+# c.JupyterApp.answer_yes = False
+
+## Full path of a config file.
+#  Default: ''
+# c.JupyterApp.config_file = ''
+
+## Specify a config file to load.
+#  Default: ''
+# c.JupyterApp.config_file_name = ''
+
+## Generate default config file.
+#  Default: False
+# c.JupyterApp.generate_config = False
+
+## The date format used by logging formatters for %(asctime)s
+#  See also: Application.log_datefmt
+# c.JupyterApp.log_datefmt = '%Y-%m-%d %H:%M:%S'
+
+## The Logging format template
+#  See also: Application.log_format
+# c.JupyterApp.log_format = '[%(name)s]%(highlevel)s %(message)s'
+
+## Set the log level by value or name.
+#  See also: Application.log_level
+# c.JupyterApp.log_level = 30
+
+## 
+#  See also: Application.logging_config
+# c.JupyterApp.logging_config = {}
+
+## Instead of starting the Application, dump configuration to stdout
+#  See also: Application.show_config
+# c.JupyterApp.show_config = False
+
+## Instead of starting the Application, dump configuration to stdout (as JSON)
+#  See also: Application.show_config_json
+# c.JupyterApp.show_config_json = False
+
+#------------------------------------------------------------------------------
+# ExtensionApp(JupyterApp) configuration
+#------------------------------------------------------------------------------
+## Base class for configurable Jupyter Server Extension Applications.
+#  
+#      ExtensionApp subclasses can be initialized two ways:
+#  
+#      - Extension is listed as a jpserver_extension, and ServerApp calls
+#        its load_jupyter_server_extension classmethod. This is the
+#        classic way of loading a server extension.
+#  
+#      - Extension is launched directly by calling its `launch_instance`
+#        class method. This method can be set as a entry_point in
+#        the extensions setup.py.
+
+## Answer yes to any prompts.
+#  See also: JupyterApp.answer_yes
+# c.ExtensionApp.answer_yes = False
+
+## Full path of a config file.
+#  See also: JupyterApp.config_file
+# c.ExtensionApp.config_file = ''
+
+## Specify a config file to load.
+#  See also: JupyterApp.config_file_name
+# c.ExtensionApp.config_file_name = ''
+
+#  Default: ''
+# c.ExtensionApp.default_url = ''
+
+## Generate default config file.
+#  See also: JupyterApp.generate_config
+# c.ExtensionApp.generate_config = False
+
+## Handlers appended to the server.
+#  Default: []
+# c.ExtensionApp.handlers = []
+
+## The date format used by logging formatters for %(asctime)s
+#  See also: Application.log_datefmt
+# c.ExtensionApp.log_datefmt = '%Y-%m-%d %H:%M:%S'
+
+## The Logging format template
+#  See also: Application.log_format
+# c.ExtensionApp.log_format = '[%(name)s]%(highlevel)s %(message)s'
+
+## Set the log level by value or name.
+#  See also: Application.log_level
+# c.ExtensionApp.log_level = 30
+
+## 
+#  See also: Application.logging_config
+# c.ExtensionApp.logging_config = {}
+
+## Whether to open in a browser after starting.
+#          The specific browser used is platform dependent and
+#          determined by the python standard library `webbrowser`
+#          module, unless it is overridden using the --browser
+#          (ServerApp.browser) configuration option.
+#  Default: False
+# c.ExtensionApp.open_browser = False
+
+## Settings that will passed to the server.
+#  Default: {}
+# c.ExtensionApp.settings = {}
+
+## Instead of starting the Application, dump configuration to stdout
+#  See also: Application.show_config
+# c.ExtensionApp.show_config = False
+
+## Instead of starting the Application, dump configuration to stdout (as JSON)
+#  See also: Application.show_config_json
+# c.ExtensionApp.show_config_json = False
+
+## paths to search for serving static files.
+#  
+#          This allows adding javascript/css to be available from the notebook server machine,
+#          or overriding individual files in the IPython
+#  Default: []
+# c.ExtensionApp.static_paths = []
+
+## Url where the static assets for the extension are served.
+#  Default: ''
+# c.ExtensionApp.static_url_prefix = ''
+
+## Paths to search for serving jinja templates.
+#  
+#          Can be used to override templates from notebook.templates.
+#  Default: []
+# c.ExtensionApp.template_paths = []
+
+#------------------------------------------------------------------------------
+# LabServerApp(ExtensionApp) configuration
+#------------------------------------------------------------------------------
+## A Lab Server Application that runs out-of-the-box
+
+## "A list of comma-separated URIs to get the allowed extensions list
+#  
+#  .. versionchanged:: 2.0.0
+#      `LabServerApp.whitetlist_uris` renamed to `allowed_extensions_uris`
+#  Default: ''
+# c.LabServerApp.allowed_extensions_uris = ''
+
+## Answer yes to any prompts.
+#  See also: JupyterApp.answer_yes
+# c.LabServerApp.answer_yes = False
+
+## The application settings directory.
+#  Default: ''
+# c.LabServerApp.app_settings_dir = ''
+
+## The url path for the application.
+#  Default: '/lab'
+# c.LabServerApp.app_url = '/lab'
+
+## Deprecated, use `LabServerApp.blocked_extensions_uris`
+#  Default: ''
+# c.LabServerApp.blacklist_uris = ''
+
+## A list of comma-separated URIs to get the blocked extensions list
+#  
+#  .. versionchanged:: 2.0.0
+#      `LabServerApp.blacklist_uris` renamed to `blocked_extensions_uris`
+#  Default: ''
+# c.LabServerApp.blocked_extensions_uris = ''
+
+## Whether to cache files on the server. This should be `True` except in dev
+#  mode.
+#  Default: True
+# c.LabServerApp.cache_files = True
+
+## Full path of a config file.
+#  See also: JupyterApp.config_file
+# c.LabServerApp.config_file = ''
+
+## Specify a config file to load.
+#  See also: JupyterApp.config_file_name
+# c.LabServerApp.config_file_name = ''
+
+## Whether getting a relative (False) or absolute (True) path when copying a
+#  path.
+#  Default: False
+# c.LabServerApp.copy_absolute_path = False
+
+## Extra paths to look for federated JupyterLab extensions
+#  Default: []
+# import os.path
+# c.LabServerApp.extra_labextensions_path = [os.path.expanduser("~/micromamba/envs/python_libs/share/jupyter/labextensions")]
+
+## Generate default config file.
+#  See also: JupyterApp.generate_config
+# c.LabServerApp.generate_config = False
+
+## Handlers appended to the server.
+#  See also: ExtensionApp.handlers
+# c.LabServerApp.handlers = []
+
+## Options to pass to the jinja2 environment for this
+#  Default: {}
+# c.LabServerApp.jinja2_options = {}
+
+## The standard paths to look in for federated JupyterLab extensions
+#  Default: []
+# c.LabServerApp.labextensions_path = []
+
+## The url for federated JupyterLab extensions
+#  Default: ''
+# c.LabServerApp.labextensions_url = ''
+
+## The interval delay in seconds to refresh the lists
+#  Default: 3600
+# c.LabServerApp.listings_refresh_seconds = 3600
+
+## The optional kwargs to use for the listings HTTP requests             as
+#  described on https://2.python-requests.org/en/v2.7.0/api/#requests.request
+#  Default: {}
+# c.LabServerApp.listings_request_options = {}
+
+## The listings url.
+#  Default: ''
+# c.LabServerApp.listings_url = ''
+
+## The date format used by logging formatters for %(asctime)s
+#  See also: Application.log_datefmt
+# c.LabServerApp.log_datefmt = '%Y-%m-%d %H:%M:%S'
+
+## The Logging format template
+#  See also: Application.log_format
+# c.LabServerApp.log_format = '[%(name)s]%(highlevel)s %(message)s'
+
+## Set the log level by value or name.
+#  See also: Application.log_level
+# c.LabServerApp.log_level = 30
+
+## 
+#  See also: Application.logging_config
+# c.LabServerApp.logging_config = {}
+
+## Whether a notebook should start a kernel automatically.
+#  Default: True
+# c.LabServerApp.notebook_starts_kernel = True
+
+## Whether to open in a browser after starting.
+#  See also: ExtensionApp.open_browser
+# c.LabServerApp.open_browser = False
+
+## The optional location of the settings schemas directory. If given, a handler
+#  will be added for settings.
+#  Default: ''
+# c.LabServerApp.schemas_dir = ''
+
+## Settings that will passed to the server.
+#  See also: ExtensionApp.settings
+# c.LabServerApp.settings = {}
+
+## The url path of the settings handler.
+#  Default: ''
+# c.LabServerApp.settings_url = ''
+
+## Instead of starting the Application, dump configuration to stdout
+#  See also: Application.show_config
+# c.LabServerApp.show_config = False
+
+## Instead of starting the Application, dump configuration to stdout (as JSON)
+#  See also: Application.show_config_json
+# c.LabServerApp.show_config_json = False
+
+## The optional location of local static files. If given, a static file handler
+#  will be added.
+#  Default: ''
+# c.LabServerApp.static_dir = ''
+
+## paths to search for serving static files.
+#  See also: ExtensionApp.static_paths
+# c.LabServerApp.static_paths = []
+
+## Url where the static assets for the extension are served.
+#  See also: ExtensionApp.static_url_prefix
+# c.LabServerApp.static_url_prefix = ''
+
+## Paths to search for serving jinja templates.
+#  See also: ExtensionApp.template_paths
+# c.LabServerApp.template_paths = []
+
+## The application templates directory.
+#  Default: ''
+# c.LabServerApp.templates_dir = ''
+
+## The optional location of the themes directory. If given, a handler will be
+#  added for themes.
+#  Default: ''
+# c.LabServerApp.themes_dir = ''
+
+## The theme url.
+#  Default: ''
+# c.LabServerApp.themes_url = ''
+
+## The url path of the translations handler.
+#  Default: ''
+# c.LabServerApp.translations_api_url = ''
+
+## The url path of the tree handler.
+#  Default: ''
+# c.LabServerApp.tree_url = ''
+
+## The optional location of the user settings directory.
+#  Default: ''
+# c.LabServerApp.user_settings_dir = ''
+
+## Deprecated, use `LabServerApp.allowed_extensions_uris`
+#  Default: ''
+# c.LabServerApp.whitelist_uris = ''
+
+## The url path of the workspaces API.
+#  Default: ''
+# c.LabServerApp.workspaces_api_url = ''
+
+## The optional location of the saved workspaces directory. If given, a handler
+#  will be added for workspaces.
+#  Default: ''
+# c.LabServerApp.workspaces_dir = ''
+
+#------------------------------------------------------------------------------
+# LabApp(LabServerApp) configuration
+#------------------------------------------------------------------------------
+## 
+#  See also: LabServerApp.allowed_extensions_uris
+# c.LabApp.allowed_extensions_uris = ''
+
+## Answer yes to any prompts.
+#  See also: JupyterApp.answer_yes
+# c.LabApp.answer_yes = False
+
+## The app directory to launch JupyterLab from.
+#  Default: None
+# c.LabApp.app_dir = None
+
+## The application settings directory.
+#  Default: ''
+# c.LabApp.app_settings_dir = ''
+
+## The url path for the application.
+#  Default: '/lab'
+# c.LabApp.app_url = '/lab'
+
+## Deprecated, use `LabServerApp.blocked_extensions_uris`
+#  See also: LabServerApp.blacklist_uris
+# c.LabApp.blacklist_uris = ''
+
+## 
+#  See also: LabServerApp.blocked_extensions_uris
+# c.LabApp.blocked_extensions_uris = ''
+
+## Whether to cache files on the server. This should be `True` except in dev
+#  mode.
+#  Default: True
+# c.LabApp.cache_files = True
+
+## A callable class that receives the current version at instantiation and
+#  calling it must return asynchronously a string indicating which version is
+#  available and how to install or None if no update is available. The string
+#  supports Markdown format.
+#  Default: 'jupyterlab.handlers.announcements.CheckForUpdate'
+# c.LabApp.check_for_updates_class = 'jupyterlab.handlers.announcements.CheckForUpdate'
+
+## To enable real-time collaboration, you must install the extension `jupyter_collaboration`.
+#          You can install it using pip for example:
+#  
+#              python -m pip install jupyter_collaboration
+#  
+#          This flag is now deprecated and will be removed in JupyterLab v5.
+#  Default: False
+# c.LabApp.collaborative = False
+
+## Full path of a config file.
+#  See also: JupyterApp.config_file
+# c.LabApp.config_file = ''
+
+## Specify a config file to load.
+#  See also: JupyterApp.config_file_name
+# c.LabApp.config_file_name = ''
+
+## Whether getting a relative (False) or absolute (True) path when copying a
+#  path.
+#  Default: False
+# c.LabApp.copy_absolute_path = False
+
+## Whether to start the app in core mode. In this mode, JupyterLab
+#          will run using the JavaScript assets that are within the installed
+#          JupyterLab Python package. In core mode, third party extensions are disabled.
+#          The `--dev-mode` flag is an alias to this to be used when the Python package
+#          itself is installed in development mode (`pip install -e .`).
+#  Default: False
+# c.LabApp.core_mode = False
+
+## Whether custom CSS is loaded on the page.
+#      Defaults to False.
+#  Default: False
+# c.LabApp.custom_css = False
+
+## The default URL to redirect to from `/`
+#  Default: '/lab'
+# c.LabApp.default_url = '/lab'
+
+## Whether to start the app in dev mode. Uses the unpublished local
+#          JavaScript packages in the `dev_mode` folder.  In this case JupyterLab will
+#          show a red stripe at the top of the page.  It can only be used if JupyterLab
+#          is installed as `pip install -e .`.
+#  Default: False
+# c.LabApp.dev_mode = False
+
+## Whether to expose the global app instance to browser via window.jupyterapp
+#  Default: False
+# c.LabApp.expose_app_in_browser = False
+
+## The extension manager factory to use. The default options are:
+#          "readonly" for a manager without installation capability or "pypi" for
+#          a manager using PyPi.org and pip to install extensions.
+#  Default: 'pypi'
+# c.LabApp.extension_manager = 'pypi'
+
+## Whether to load prebuilt extensions in dev mode. This may be
+#          useful to run and test prebuilt extensions in development installs of
+#          JupyterLab. APIs in a JupyterLab development install may be
+#          incompatible with published packages, so prebuilt extensions compiled
+#          against published packages may not work correctly.
+#  Default: False
+# c.LabApp.extensions_in_dev_mode = False
+
+## Extra paths to look for federated JupyterLab extensions
+#  Default: []
+# c.LabApp.extra_labextensions_path = []
+
+## Generate default config file.
+#  See also: JupyterApp.generate_config
+# c.LabApp.generate_config = False
+
+## Handlers appended to the server.
+#  See also: ExtensionApp.handlers
+# c.LabApp.handlers = []
+
+## Options to pass to the jinja2 environment for this
+#  Default: {}
+# c.LabApp.jinja2_options = {}
+
+## The standard paths to look in for federated JupyterLab extensions
+#  Default: []
+# c.LabApp.labextensions_path = []
+
+## The url for federated JupyterLab extensions
+#  Default: ''
+# c.LabApp.labextensions_url = ''
+
+## The interval delay in seconds to refresh the lists
+#  See also: LabServerApp.listings_refresh_seconds
+# c.LabApp.listings_refresh_seconds = 3600
+
+## The optional kwargs to use for the listings HTTP requests             as
+#  described on https://2.python-requests.org/en/v2.7.0/api/#requests.request
+#  See also: LabServerApp.listings_request_options
+# c.LabApp.listings_request_options = {}
+
+## The listings url.
+#  Default: ''
+# c.LabApp.listings_url = ''
+
+## Whether all plugins are locked (cannot be enabled/disabled from the UI)
+#  Default: False
+# c.LabApp.lock_all_plugins = False
+
+## The date format used by logging formatters for %(asctime)s
+#  See also: Application.log_datefmt
+# c.LabApp.log_datefmt = '%Y-%m-%d %H:%M:%S'
+
+## The Logging format template
+#  See also: Application.log_format
+# c.LabApp.log_format = '[%(name)s]%(highlevel)s %(message)s'
+
+## Set the log level by value or name.
+#  See also: Application.log_level
+# c.LabApp.log_level = 30
+
+## 
+#  See also: Application.logging_config
+# c.LabApp.logging_config = {}
+
+## URL that serves news Atom feed; by default the JupyterLab organization
+#  announcements will be fetched. Set to None to turn off fetching announcements.
+#  Default: 'https://jupyterlab.github.io/assets/feed.xml'
+# c.LabApp.news_url = 'https://jupyterlab.github.io/assets/feed.xml'
+
+## Whether a notebook should start a kernel automatically.
+#  Default: True
+# c.LabApp.notebook_starts_kernel = True
+
+## Whether to open in a browser after starting.
+#  See also: ExtensionApp.open_browser
+# c.LabApp.open_browser = False
+
+## The override url for static lab assets, typically a CDN.
+#  Default: ''
+# c.LabApp.override_static_url = ''
+
+## The override url for static lab theme assets, typically a CDN.
+#  Default: ''
+# c.LabApp.override_theme_url = ''
+
+## The optional location of the settings schemas directory. If given, a handler
+#  will be added for settings.
+#  Default: ''
+# c.LabApp.schemas_dir = ''
+
+## Settings that will passed to the server.
+#  See also: ExtensionApp.settings
+# c.LabApp.settings = {}
+
+## The url path of the settings handler.
+#  Default: ''
+# c.LabApp.settings_url = ''
+
+## Instead of starting the Application, dump configuration to stdout
+#  See also: Application.show_config
+# c.LabApp.show_config = False
+
+## Instead of starting the Application, dump configuration to stdout (as JSON)
+#  See also: Application.show_config_json
+# c.LabApp.show_config_json = False
+
+## Whether to skip the initial install and JS build of the app in dev mode
+#  Default: False
+# c.LabApp.skip_dev_build = False
+
+## Splice source packages into app directory.
+#  Default: False
+# c.LabApp.splice_source = False
+
+## The optional location of local static files. If given, a static file handler
+#  will be added.
+#  Default: ''
+# c.LabApp.static_dir = ''
+
+## paths to search for serving static files.
+#  See also: ExtensionApp.static_paths
+# c.LabApp.static_paths = []
+
+## Url where the static assets for the extension are served.
+#  See also: ExtensionApp.static_url_prefix
+# c.LabApp.static_url_prefix = ''
+
+## Paths to search for serving jinja templates.
+#  See also: ExtensionApp.template_paths
+# c.LabApp.template_paths = []
+
+## The application templates directory.
+#  Default: ''
+# c.LabApp.templates_dir = ''
+
+## The optional location of the themes directory. If given, a handler will be
+#  added for themes.
+#  Default: ''
+# c.LabApp.themes_dir = ''
+
+## The theme url.
+#  Default: ''
+# c.LabApp.themes_url = ''
+
+## The url path of the translations handler.
+#  Default: ''
+# c.LabApp.translations_api_url = ''
+
+## The url path of the tree handler.
+#  Default: ''
+# c.LabApp.tree_url = ''
+
+## The directory for user settings.
+#  Default: '/Users/dnachun/.jupyter/lab/user-settings'
+# c.LabApp.user_settings_dir = '/Users/dnachun/.jupyter/lab/user-settings'
+
+## Whether to serve the app in watch mode
+#  Default: False
+# c.LabApp.watch = False
+
+## Deprecated, use `LabServerApp.allowed_extensions_uris`
+#  See also: LabServerApp.whitelist_uris
+# c.LabApp.whitelist_uris = ''
+
+## The url path of the workspaces API.
+#  Default: ''
+# c.LabApp.workspaces_api_url = ''
+
+## The directory for workspaces
+#  Default: '/Users/dnachun/.jupyter/lab/workspaces'
+# c.LabApp.workspaces_dir = '/Users/dnachun/.jupyter/lab/workspaces'
+
+#------------------------------------------------------------------------------
+# ServerApp(JupyterApp) configuration
+#------------------------------------------------------------------------------
+## The Jupyter Server application class.
+
+## Set the Access-Control-Allow-Credentials: true header
+#  Default: False
+# c.ServerApp.allow_credentials = False
+
+## Whether or not to allow external kernels, whose connection files are placed in
+#  external_connection_dir.
+#  Default: False
+# c.ServerApp.allow_external_kernels = False
+
+## Set the Access-Control-Allow-Origin header
+#  
+#          Use '*' to allow any origin to access your server.
+#  
+#          Takes precedence over allow_origin_pat.
+#  Default: ''
+# c.ServerApp.allow_origin = ''
+
+## Use a regular expression for the Access-Control-Allow-Origin header
+#  
+#          Requests from an origin matching the expression will get replies with:
+#  
+#              Access-Control-Allow-Origin: origin
+#  
+#          where `origin` is the origin of the request.
+#  
+#          Ignored if allow_origin is set.
+#  Default: ''
+# c.ServerApp.allow_origin_pat = ''
+
+## DEPRECATED in 2.0. Use PasswordIdentityProvider.allow_password_change
+#  Default: True
+# c.ServerApp.allow_password_change = True
+
+## Allow requests where the Host header doesn't point to a local server
+#  
+#         By default, requests get a 403 forbidden response if the 'Host' header
+#         shows that the browser thinks it's on a non-local domain.
+#         Setting this option to True disables this check.
+#  
+#         This protects against 'DNS rebinding' attacks, where a remote web server
+#         serves you a page and then changes its DNS to send later requests to a
+#         local IP, bypassing same-origin checks.
+#  
+#         Local IP addresses (such as 127.0.0.1 and ::1) are allowed as local,
+#         along with hostnames configured in local_hostnames.
+#  Default: False
+# c.ServerApp.allow_remote_access = False
+
+## Whether to allow the user to run the server as root.
+#  Default: False
+c.ServerApp.allow_root = True
+
+## Allow unauthenticated access to endpoints without authentication rule.
+#  
+#          When set to `True` (default in jupyter-server 2.0, subject to change
+#          in the future), any request to an endpoint without an authentication rule
+#          (either `@tornado.web.authenticated`, or `@allow_unauthenticated`)
+#          will be permitted, regardless of whether user has logged in or not.
+#  
+#          When set to `False`, logging in will be required for access to each endpoint,
+#          excluding the endpoints marked with `@allow_unauthenticated` decorator.
+#  
+#          This option can be configured using `JUPYTER_SERVER_ALLOW_UNAUTHENTICATED_ACCESS`
+#          environment variable: any non-empty value other than "true" and "yes" will
+#          prevent unauthenticated access to endpoints without `@allow_unauthenticated`.
+#  Default: True
+# c.ServerApp.allow_unauthenticated_access = True
+
+## Answer yes to any prompts.
+#  See also: JupyterApp.answer_yes
+# c.ServerApp.answer_yes = False
+
+## "
+#          Require authentication to access prometheus metrics.
+#  Default: True
+# c.ServerApp.authenticate_prometheus = True
+
+## The authorizer class to use.
+#  Default: 'jupyter_server.auth.authorizer.AllowAllAuthorizer'
+# c.ServerApp.authorizer_class = 'jupyter_server.auth.authorizer.AllowAllAuthorizer'
+
+## Reload the webapp when changes are made to any Python src files.
+#  Default: False
+# c.ServerApp.autoreload = False
+
+## The base URL for the Jupyter server.
+#  
+#                         Leading and trailing slashes can be omitted,
+#                         and will automatically be added.
+#  Default: '/'
+# c.ServerApp.base_url = '/'
+
+## Specify what command to use to invoke a web
+#                        browser when starting the server. If not specified, the
+#                        default browser will be determined by the `webbrowser`
+#                        standard library module, which allows setting of the
+#                        BROWSER environment variable to override it.
+#  Default: ''
+# c.ServerApp.browser = ''
+
+## The full path to an SSL/TLS certificate file.
+#  Default: ''
+# c.ServerApp.certfile = ''
+
+## The full path to a certificate authority certificate for SSL/TLS client
+#  authentication.
+#  Default: ''
+# c.ServerApp.client_ca = ''
+
+## Full path of a config file.
+#  See also: JupyterApp.config_file
+# c.ServerApp.config_file = ''
+
+## Specify a config file to load.
+#  See also: JupyterApp.config_file_name
+# c.ServerApp.config_file_name = ''
+
+## The config manager class to use
+#  Default: 'jupyter_server.services.config.manager.ConfigManager'
+# c.ServerApp.config_manager_class = 'jupyter_server.services.config.manager.ConfigManager'
+
+## The content manager class to use.
+#  Default: 'jupyter_server.services.contents.largefilemanager.AsyncLargeFileManager'
+# c.ServerApp.contents_manager_class = 'jupyter_server.services.contents.largefilemanager.AsyncLargeFileManager'
+
+## DEPRECATED. Use IdentityProvider.cookie_options
+#  Default: {}
+# c.ServerApp.cookie_options = {}
+
+## The random bytes used to secure cookies.
+#          By default this is a new random number every time you start the server.
+#          Set it to a value in a config file to enable logins to persist across server sessions.
+#  
+#          Note: Cookie secrets should be kept private, do not share config files with
+#          cookie_secret stored in plaintext (you can read the value from a file).
+#  Default: b''
+# c.ServerApp.cookie_secret = b''
+
+## The file where the cookie secret is stored.
+#  Default: ''
+# c.ServerApp.cookie_secret_file = ''
+
+## Override URL shown to users.
+#  
+#          Replace actual URL, including protocol, address, port and base URL,
+#          with the given value when displaying URL to the users. Do not change
+#          the actual connection URL. If authentication token is enabled, the
+#          token is added to the custom URL automatically.
+#  
+#          This option is intended to be used when the URL to display to the user
+#          cannot be determined reliably by the Jupyter server (proxified
+#          or containerized setups for example).
+#  Default: ''
+# c.ServerApp.custom_display_url = ''
+
+## The default URL to redirect to from `/`
+#  Default: '/'
+# c.ServerApp.default_url = '/'
+
+## Disable cross-site-request-forgery protection
+#  
+#          Jupyter server includes protection from cross-site request forgeries,
+#          requiring API requests to either:
+#  
+#          - originate from pages served by this server (validated with XSRF cookie and token), or
+#          - authenticate with a token
+#  
+#          Some anonymous compute resources still desire the ability to run code,
+#          completely without authentication.
+#          These services can disable all authentication and security checks,
+#          with the full knowledge of what that implies.
+#  Default: False
+# c.ServerApp.disable_check_xsrf = False
+
+## The directory to look at for external kernel connection files, if
+#  allow_external_kernels is True. Defaults to Jupyter
+#  runtime_dir/external_kernels. Make sure that this directory is not filled with
+#  left-over connection files, that could result in unnecessary kernel manager
+#  creations.
+#  Default: None
+# c.ServerApp.external_connection_dir = None
+
+## handlers that should be loaded at higher priority than the default services
+#  Default: []
+# c.ServerApp.extra_services = []
+
+## Extra paths to search for serving static files.
+#  
+#          This allows adding javascript/css to be available from the Jupyter server machine,
+#          or overriding individual files in the IPython
+#  Default: []
+# c.ServerApp.extra_static_paths = []
+
+## Extra paths to search for serving jinja templates.
+#  
+#          Can be used to override templates from jupyter_server.templates.
+#  Default: []
+# c.ServerApp.extra_template_paths = []
+
+## Open the named file when the application is launched.
+#  Default: ''
+# c.ServerApp.file_to_run = ''
+
+## The URL prefix where files are opened directly.
+#  Default: 'notebooks'
+# c.ServerApp.file_url_prefix = 'notebooks'
+
+## Generate default config file.
+#  See also: JupyterApp.generate_config
+# c.ServerApp.generate_config = False
+
+## DEPRECATED. Use IdentityProvider.get_secure_cookie_kwargs
+#  Default: {}
+# c.ServerApp.get_secure_cookie_kwargs = {}
+
+## The identity provider class to use.
+#  Default: 'jupyter_server.auth.identity.PasswordIdentityProvider'
+# c.ServerApp.identity_provider_class = 'jupyter_server.auth.identity.PasswordIdentityProvider'
+
+## DEPRECATED. Use ZMQChannelsWebsocketConnection.iopub_data_rate_limit
+#  Default: 0.0
+# c.ServerApp.iopub_data_rate_limit = 0.0
+
+## DEPRECATED. Use ZMQChannelsWebsocketConnection.iopub_msg_rate_limit
+#  Default: 0.0
+# c.ServerApp.iopub_msg_rate_limit = 0.0
+
+## The IP address the Jupyter server will listen on.
+#  Default: 'localhost'
+c.ServerApp.ip = '0.0.0.0'
+
+## Supply extra arguments that will be passed to Jinja environment.
+#  Default: {}
+# c.ServerApp.jinja_environment_options = {}
+
+## Extra variables to supply to jinja templates when rendering.
+#  Default: {}
+# c.ServerApp.jinja_template_vars = {}
+
+## Dict of Python modules to load as Jupyter server extensions.Entry values can
+#  be used to enable and disable the loading ofthe extensions. The extensions
+#  will be loaded in alphabetical order.
+#  Default: {}
+c.ServerApp.jpserver_extensions = {"ipyparallel": True}
+
+## The kernel manager class to use.
+#  Default: 'jupyter_server.services.kernels.kernelmanager.MappingKernelManager'
+# c.ServerApp.kernel_manager_class = 'jupyter_server.services.kernels.kernelmanager.MappingKernelManager'
+
+## The kernel spec manager class to use. Should be a subclass of
+#  `jupyter_client.kernelspec.KernelSpecManager`.
+#  
+#  The Api of KernelSpecManager is provisional and might change without warning
+#  between this version of Jupyter and the next stable one.
+#  Default: 'builtins.object'
+# c.ServerApp.kernel_spec_manager_class = 'builtins.object'
+
+## The kernel websocket connection class to use.
+#  Default: 'jupyter_server.services.kernels.connection.base.BaseKernelWebsocketConnection'
+# c.ServerApp.kernel_websocket_connection_class = 'jupyter_server.services.kernels.connection.base.BaseKernelWebsocketConnection'
+
+## DEPRECATED. Use ZMQChannelsWebsocketConnection.kernel_ws_protocol
+#  Default: ''
+# c.ServerApp.kernel_ws_protocol = ''
+
+## The full path to a private key file for usage with SSL/TLS.
+#  Default: ''
+# c.ServerApp.keyfile = ''
+
+## DEPRECATED. Use ZMQChannelsWebsocketConnection.limit_rate
+#  Default: False
+# c.ServerApp.limit_rate = False
+
+## Hostnames to allow as local when allow_remote_access is False.
+#  
+#         Local IP addresses (such as 127.0.0.1 and ::1) are automatically accepted
+#         as local as well.
+#  Default: ['localhost']
+# c.ServerApp.local_hostnames = ['localhost']
+
+## The date format used by logging formatters for %(asctime)s
+#  See also: Application.log_datefmt
+# c.ServerApp.log_datefmt = '%Y-%m-%d %H:%M:%S'
+
+## The Logging format template
+#  See also: Application.log_format
+# c.ServerApp.log_format = '[%(name)s]%(highlevel)s %(message)s'
+
+## Set the log level by value or name.
+#  See also: Application.log_level
+# c.ServerApp.log_level = 30
+
+## 
+#  See also: Application.logging_config
+# c.ServerApp.logging_config = {}
+
+## The login handler class to use.
+#  Default: 'jupyter_server.auth.login.LegacyLoginHandler'
+# c.ServerApp.login_handler_class = 'jupyter_server.auth.login.LegacyLoginHandler'
+
+## The logout handler class to use.
+#  Default: 'jupyter_server.auth.logout.LogoutHandler'
+# c.ServerApp.logout_handler_class = 'jupyter_server.auth.logout.LogoutHandler'
+
+## Sets the maximum allowed size of the client request body, specified in the
+#  Content-Length request header field. If the size in a request exceeds the
+#  configured value, a malformed HTTP message is returned to the client.
+#  
+#  Note: max_body_size is applied even in streaming mode.
+#  Default: 536870912
+# c.ServerApp.max_body_size = 536870912
+
+## Gets or sets the maximum amount of memory, in bytes, that is allocated for use
+#  by the buffer manager.
+#  Default: 536870912
+# c.ServerApp.max_buffer_size = 536870912
+
+## Gets or sets a lower bound on the open file handles process resource limit.
+#  This may need to be increased if you run into an OSError: [Errno 24] Too many
+#  open files. This is not applicable when running on Windows.
+#  Default: 0
+# c.ServerApp.min_open_files_limit = 0
+
+## DEPRECATED, use root_dir.
+#  Default: ''
+# c.ServerApp.notebook_dir = ''
+
+## Whether to open in a browser after starting.
+#                          The specific browser used is platform dependent and
+#                          determined by the python standard library `webbrowser`
+#                          module, unless it is overridden using the --browser
+#                          (ServerApp.browser) configuration option.
+#  Default: False
+# c.ServerApp.open_browser = False
+
+## DEPRECATED in 2.0. Use PasswordIdentityProvider.hashed_password
+#  Default: ''
+# c.ServerApp.password = ''
+
+## DEPRECATED in 2.0. Use PasswordIdentityProvider.password_required
+#  Default: False
+# c.ServerApp.password_required = False
+
+## The port the server will listen on (env: JUPYTER_PORT).
+#  Default: 0
+# c.ServerApp.port = 0
+
+## The number of additional ports to try if the specified port is not available
+#  (env: JUPYTER_PORT_RETRIES).
+#  Default: 50
+# c.ServerApp.port_retries = 50
+
+## Preferred starting directory to use for notebooks and kernels.
+#  ServerApp.preferred_dir is deprecated in jupyter-server 2.0. Use
+#  FileContentsManager.preferred_dir instead
+#  Default: ''
+# c.ServerApp.preferred_dir = ''
+
+## DISABLED: use %pylab or %matplotlib in the notebook to enable matplotlib.
+#  Default: 'disabled'
+# c.ServerApp.pylab = 'disabled'
+
+## If True, display controls to shut down the Jupyter server, such as menu items
+#  or buttons.
+#  Default: True
+# c.ServerApp.quit_button = True
+
+## DEPRECATED. Use ZMQChannelsWebsocketConnection.rate_limit_window
+#  Default: 0.0
+# c.ServerApp.rate_limit_window = 0.0
+
+## Reraise exceptions encountered loading server extensions?
+#  Default: False
+# c.ServerApp.reraise_server_extension_failures = False
+
+## The directory to use for notebooks and kernels.
+#  Default: ''
+# c.ServerApp.root_dir = ''
+
+## The session manager class to use.
+#  Default: 'builtins.object'
+# c.ServerApp.session_manager_class = 'builtins.object'
+
+## Instead of starting the Application, dump configuration to stdout
+#  See also: Application.show_config
+# c.ServerApp.show_config = False
+
+## Instead of starting the Application, dump configuration to stdout (as JSON)
+#  See also: Application.show_config_json
+# c.ServerApp.show_config_json = False
+
+## Shut down the server after N seconds with no kernelsrunning and no activity.
+#  This can be used together with culling idle kernels
+#  (MappingKernelManager.cull_idle_timeout) to shutdown the Jupyter server when
+#  it's not in use. This is not precisely timed: it may shut down up to a minute
+#  later. 0 (the default) disables this automatic shutdown.
+#  Default: 0
+# c.ServerApp.shutdown_no_activity_timeout = 0
+
+## The UNIX socket the Jupyter server will listen on.
+#  Default: ''
+# c.ServerApp.sock = ''
+
+## The permissions mode for UNIX socket creation (default: 0600).
+#  Default: '0600'
+# c.ServerApp.sock_mode = '0600'
+
+## Supply SSL options for the tornado HTTPServer.
+#              See the tornado docs for details.
+#  Default: {}
+# c.ServerApp.ssl_options = {}
+
+## Paths to set up static files as immutable.
+#  
+#  This allow setting up the cache control of static files as immutable. It
+#  should be used for static file named with a hash for instance.
+#  Default: []
+# c.ServerApp.static_immutable_cache = []
+
+## Supply overrides for terminado. Currently only supports "shell_command".
+#  Default: {}
+# c.ServerApp.terminado_settings = {}
+
+## Set to False to disable terminals.
+#  
+#           This does *not* make the server more secure by itself.
+#           Anything the user can in a terminal, they can also do in a notebook.
+#  
+#           Terminals may also be automatically disabled if the terminado package
+#           is not available.
+#  Default: False
+# c.ServerApp.terminals_enabled = False
+
+## DEPRECATED. Use IdentityProvider.token
+#  Default: '<DEPRECATED>'
+# c.ServerApp.token = '<DEPRECATED>'
+
+## Supply overrides for the tornado.web.Application that the Jupyter server uses.
+#  Default: {}
+# c.ServerApp.tornado_settings = {}
+
+## Whether to trust or not X-Scheme/X-Forwarded-Proto and X-Real-Ip/X-Forwarded-
+#  For headerssent by the upstream reverse proxy. Necessary if the proxy handles
+#  SSL
+#  Default: False
+# c.ServerApp.trust_xheaders = False
+
+## Disable launching browser by redirect file
+#       For versions of notebook > 5.7.2, a security feature measure was added that
+#       prevented the authentication token used to launch the browser from being visible.
+#       This feature makes it difficult for other users on a multi-user system from
+#       running code in your Jupyter session as you.
+#       However, some environments (like Windows Subsystem for Linux (WSL) and Chromebooks),
+#       launching a browser using a redirect file can lead the browser failing to load.
+#       This is because of the difference in file structures/paths between the runtime and
+#       the browser.
+#  
+#       Disabling this setting to False will disable this behavior, allowing the browser
+#       to launch by using a URL and visible token (as before).
+#  Default: True
+# c.ServerApp.use_redirect_file = True
+
+## Specify where to open the server on startup. This is the
+#          `new` argument passed to the standard library method `webbrowser.open`.
+#          The behaviour is not guaranteed, but depends on browser support. Valid
+#          values are:
+#  
+#           - 2 opens a new tab,
+#           - 1 opens a new window,
+#           - 0 opens in an existing window.
+#  
+#          See the `webbrowser.open` documentation for details.
+#  Default: 2
+# c.ServerApp.webbrowser_open_new = 2
+
+## Set the tornado compression options for websocket connections.
+#  
+#  This value will be returned from
+#  :meth:`WebSocketHandler.get_compression_options`. None (default) will disable
+#  compression. A dict (even an empty one) will enable compression.
+#  
+#  See the tornado docs for WebSocketHandler.get_compression_options for details.
+#  Default: None
+# c.ServerApp.websocket_compression_options = None
+
+## Configure the websocket ping interval in seconds.
+#  
+#  Websockets are long-lived connections that are used by some Jupyter Server
+#  extensions.
+#  
+#  Periodic pings help to detect disconnected clients and keep the connection
+#  active. If this is set to None, then no pings will be performed.
+#  
+#  When a ping is sent, the client has ``websocket_ping_timeout`` seconds to
+#  respond. If no response is received within this period, the connection will be
+#  closed from the server side.
+#  Default: 0
+# c.ServerApp.websocket_ping_interval = 0
+
+## Configure the websocket ping timeout in seconds.
+#  
+#  See ``websocket_ping_interval`` for details.
+#  Default: 0
+# c.ServerApp.websocket_ping_timeout = 0
+
+## The base URL for websockets,
+#          if it differs from the HTTP server (hint: it almost certainly doesn't).
+#  
+#          Should be in the form of an HTTP origin: ws[s]://hostname[:port]
+#  Default: ''
+# c.ServerApp.websocket_url = ''
diff --git a/configs/vscode/config.yaml b/configs/vscode/config.yaml
new file mode 100644
index 0000000..ec2739a
--- /dev/null
+++ b/configs/vscode/config.yaml
@@ -0,0 +1,3 @@
+bind-addr: 0.0.0.0:8989
+auth: none
+cert: false
diff --git a/configs/vscode/settings.json b/configs/vscode/settings.json
new file mode 100644
index 0000000..d3de868
--- /dev/null
+++ b/configs/vscode/settings.json
@@ -0,0 +1,9 @@
+{
+    "path-autocomplete.pathMappings": {
+        "/": "/",
+        "./": "${folder}"
+    },
+    "r.bracketedPaste": true,
+    "r.plot.useHttpgd": true,
+    "r.rterm.linux": "${userHome}/.pixi/bin/radian"
+}
diff --git a/envs/global_packages.txt b/envs/global_packages.txt
new file mode 100644
index 0000000..8d9521c
--- /dev/null
+++ b/envs/global_packages.txt
@@ -0,0 +1,33 @@
+ark
+bcftools
+bedtools
+curl
+diffutils
+fastqc
+findutils
+gatk4
+gawk
+git
+go-ghq
+grep
+htslib
+kent-tools
+less
+pandoc
+parallel
+picard
+plink
+plink2
+python=3.12
+r-base=4.4
+ripgrep
+ruby
+sed
+snpeff
+snpsift
+tree
+trimmomatic
+unzip
+util-linux
+vim
+wget
diff --git a/envs/python_packages.txt b/envs/python_packages.txt
new file mode 100644
index 0000000..cdd887e
--- /dev/null
+++ b/envs/python_packages.txt
@@ -0,0 +1,51 @@
+altair
+bash_kernel
+cython
+dill
+feather-format
+imageio
+ipykernel
+ipywidgets
+ipympl
+ipyparallel
+ipython
+jedi-language-server
+jupyterlab
+jupyter_client
+jupyter_console
+jupyter_core
+jupyter_server
+jupyter-lsp
+jupyterlab-lsp
+jupyterlab-sos
+jupyterhub
+markdown
+markdown-kernel
+matplotlib-base
+nb_conda_kernels
+nbconvert-core
+nbdime
+nbformat
+notebook
+numba
+numexpr
+numpy
+openpyxl
+pandas
+pillow
+ptpython
+pyarrow
+python-lsp-server
+scikit-learn
+scipy
+seaborn
+statsmodels
+sympy
+tqdm
+wand
+widgetsnbextension
+sos
+sos-bash
+sos-notebook
+sos-python
+sos-r
diff --git a/envs/r_packages.txt b/envs/r_packages.txt
new file mode 100644
index 0000000..d523d6a
--- /dev/null
+++ b/envs/r_packages.txt
@@ -0,0 +1,58 @@
+bioconductor-edger
+bioconductor-illuminahumanmethylation450kmanifest
+bioconductor-illuminahumanmethylationepicmanifest
+bioconductor-impute
+bioconductor-limma
+bioconductor-minfi
+bioconductor-mofa2
+bioconductor-pcatools
+bioconductor-preprocesscore
+bioconductor-psichomics
+bioconductor-qvalue
+bioconductor-sesame
+bioconductor-sesamedata
+bioconductor-variantannotation
+r-abind
+r-ape
+r-bigsnpr
+r-biocmanager
+r-bitops
+r-catools
+r-complexupset
+r-corrplot
+r-devtools
+r-flashpcar
+r-fsusier
+r-gbj
+r-genio
+r-glmnet
+r-gplots
+r-gtools
+r-gwasrapidd
+r-harmonicmeanp
+r-httpgd
+r-hudson
+r-igraph
+r-irkernel
+r-languageserver
+r-mediation
+r-missforest
+r-mr.ash.alpha
+r-mr.mash.alpha
+r-mvsusier
+r-pacman
+r-pecotmr
+r-pgenlibr
+r-plink2r
+r-profvis
+r-qgg
+r-qqman
+r-qrank
+r-quadprog
+r-quantreg
+r-rfast
+r-rgl
+r-rmtstat
+r-seurat
+r-tidyverse
+r-watershedr
diff --git a/init.sh b/init.sh
new file mode 100755
index 0000000..596ce60
--- /dev/null
+++ b/init.sh
@@ -0,0 +1,55 @@
+#!/usr/bin/env bash
+
+set -o errexit -o nounset -o xtrace -o pipefail
+
+# Use Rprofile.site so that only pixi-installed R can see r-base packages
+mkdir -p ${HOME}/.pixi/envs/python/lib/R/etc
+echo ".libPaths('${HOME}/.pixi/envs/r-base/lib/R/library')" > ${HOME}/.pixi/envs/python/lib/R/etc/Rprofile.site
+
+# Create config files for rstudio
+mkdir -p ${HOME}/.config/rstudio
+tee ${HOME}/.config/rstudio/database.conf << EOF
+directory=${HOME}/.local/var/lib/rstudio-server
+EOF
+
+tee ${HOME}/.config/rstudio/rserver.conf << EOF
+rsession-which-r=${HOME}/.pixi/envs/r-base/bin/R
+auth-none=1
+database-config-file=${HOME}/.config/rstudio/database.conf
+server-daemonize=0
+server-data-dir=${HOME}/.local/var/run/rstudio-server
+server-user=${USER}
+EOF
+
+# Register Juypter kernels
+find ${HOME}/.pixi/envs/python/share/jupyter/kernels/ -maxdepth 1 -mindepth 1 -type d | \
+    xargs -I % jupyter-kernelspec install --log-level=50 --user %
+find ${HOME}/.pixi/envs/r-base/share/jupyter/kernels/ -maxdepth 1 -mindepth 1 -type d | \
+    xargs -I % jupyter-kernelspec install --log-level=50 --user %
+# ark --install
+
+# Jupyter configurations
+mkdir -p $HOME/.jupyter && \
+curl -s -o $HOME/.jupyter/jupyter_lab_config.py https://raw.githubusercontent.com/StatFunGen/pixi-setup/main/configs/jupyter/jupyter_lab_config.py && \
+curl -s -o $HOME/.jupyter/jupyter_server_config.py https://raw.githubusercontent.com/StatFunGen/pixi-setup/main/configs/jupyter/jupyter_server_config.py
+
+mkdir -p ${HOME}/.config/code-server
+curl -s -o $HOME/.config/code-server/config.yaml https://raw.githubusercontent.com/StatFunGen/pixi-setup/main/configs/vscode/config.yaml
+mkdir -p ${HOME}/.local/share/code-server/User
+curl -s -o $HOME/.local/share/code-server/User/settings.json https://raw.githubusercontent.com/StatFunGen/pixi-setup/main/configs/vscode/settings.json
+
+if ! command -v code-server &> /dev/null; then
+   echo "WARNING: code-server is not installed."
+else
+   code-server --install-extension ms-python.python
+   code-server --install-extension ms-toolsai.jupyter
+   code-server --install-extension reditorsupport.r
+   code-server --install-extension rdebugger.r-debugger
+   code-server --install-extension ionutvmi.path-autocomplete
+   code-server --install-extension usernamehw.errorlens
+fi
+
+# Temporary fix to run post-link scripts
+bash -c "PREFIX=${HOME}/.pixi/envs/r-base PATH=${HOME}/.pixi/envs/r-base/bin:${PATH} .bioconductor-genomeinfodbdata-post-link.sh"
+find ${HOME}/.pixi/envs/r-base/bin -name '*bioconductor-*-post-link.sh' | \
+xargs -I % bash -c "PREFIX=${HOME}/.pixi/envs/r-base PATH=${HOME}/.pixi/envs/r-base/bin:${PATH} %"
diff --git a/pixi-install.sh b/pixi-install.sh
new file mode 100755
index 0000000..41bbe52
--- /dev/null
+++ b/pixi-install.sh
@@ -0,0 +1,47 @@
+#!/usr/bin/env bash
+
+set -o errexit -o nounset -o pipefail
+
+# Determine the operating system
+if [[ "$OSTYPE" == "darwin"* ]]; then
+  # macOS
+  CONFIG_FILE="${HOME}/.zshrc"
+elif [[ "$OSTYPE" == "linux-gnu"* ]]; then
+  # Linux
+  CONFIG_FILE="${HOME}/.bashrc"
+else
+  echo "Unsupported OS. Please use macOS or Linux."
+  exit 1
+fi
+
+echo "Configuration file ${CONFIG_FILE} will be modified by this script."
+touch ${CONFIG_FILE}
+
+# Install pixi
+if ! which pixi > /dev/null 2>&1
+then
+    # Install Pixi
+    curl -fsSL https://pixi.sh/install.sh | bash
+else
+    echo "pixi is already installed."
+fi
+
+# Configure shell
+if ! grep -q 'export PATH=${HOME}/.pixi/bin:${PATH}' "${CONFIG_FILE}"; then
+    echo 'export PATH=${HOME}/.pixi/bin:${PATH}' >> "${CONFIG_FILE}"
+fi
+if ! grep -q 'unset PYTHONPATH' "${CONFIG_FILE}"; then
+  echo "unset PYTHONPATH" >> "${CONFIG_FILE}"
+fi
+if ! grep -q 'export PYDEVD_DISABLE_FILE_VALIDATION=1' "${CONFIG_FILE}"; then
+  echo "export PYDEVD_DISABLE_FILE_VALIDATION=1" >> "${CONFIG_FILE}"
+fi
+if ! which pixi > /dev/null 2>&1
+then
+    BB='\033[1;34m'
+    NC='\033[0m'
+    echo -e "${BB}pixi installed. Please run 'source ${CONFIG_FILE}' to reload your configuration or restart your terminal, and rerun this setup script.${NC}"
+    exit 1
+fi
+# set default channels
+mkdir -p ${HOME}/.pixi && echo 'default_channels = ["dnachun", "conda-forge", "bioconda"]' > ${HOME}/.pixi/config.toml
diff --git a/pixi-setup.sh b/pixi-setup.sh
new file mode 100755
index 0000000..8a4aad1
--- /dev/null
+++ b/pixi-setup.sh
@@ -0,0 +1,74 @@
+#!/usr/bin/env bash
+
+set -o nounset -o errexit -o pipefail
+
+safe_expose_remove() {
+    environment=$1
+    executable=$2
+    if [ -d ${HOME}/.pixi/envs/${environment} ]; then
+        exposed_exes=$(pixi global list --environment ${environment} | tail -n 3 | head -n 1 | tr ',' '\n')
+        if [[ " ${exposed_exes[*]} " =~ [[:space:]]${executable}[[:space:]] ]]; then
+            pixi global expose remove ${executable}
+        fi
+    fi
+}
+
+export -f safe_expose_remove
+
+install_global_packages() {
+    package_list=$1
+    missing_pkgs=$(comm -13 <(ls ${HOME}/.pixi/envs | sort -u) <(sort -u ${package_list}))
+    if (($(echo ${missing_pkgs} | wc -w) > 0 )); then
+        pixi global install $(echo ${missing_pkgs} | tr '\n' ' ')
+    fi
+}
+
+export -f install_global_packages
+
+inject_packages() {
+    environment=$1
+    package_list=$2
+    missing_pkgs=$(comm -13 <(pixi global list --environment ${environment} | cut -f 1 -d ' ' | head -n -6 | tail -n +3 | sort -u) <(sort -u ${package_list}))
+    if (( $(echo ${missing_pkgs} | wc -w) > 0 )); then
+        pixi global install --environment ${environment} $(echo ${missing_pkgs} | tr '\n' ' ')
+    fi
+}
+
+export -f inject_packages
+
+# If PIXI_HOME is not set already, set it to ${HOME}/.pixi
+if [[ -z ${PIXI_HOME:-} ]]; then
+    export PIXI_HOME="${HOME}/.pixi"
+fi
+
+# Install pixi
+curl -fsSL https://raw.githubusercontent.com/StatFunGen/pixi-setup/main/pixi-install.sh | bash
+
+# Install global packages
+install_global_packages <(curl -fsSL https://raw.githubusercontent.com/StatFunGen/pixi-setup/main/envs/global_packages.txt | grep -v "#")
+if [[ "$OSTYPE" == "linux-gnu"* ]]; then
+    safe_expose_remove util-linux kill
+fi
+install_global_packages <(echo "coreutils")
+if [[ "$OSTYPE" == "linux-gnu"* ]]; then
+    safe_expose_remove coreutils kill
+    safe_expose_remove coreutils uptime
+    install_global_packages <(echo "procps-ng")
+    install_global_packages <(echo "code-server")
+fi
+
+echo "Installing recommended R libraries ..."
+inject_packages r-base <(curl -fsSL https://raw.githubusercontent.com/StatFunGen/pixi-setup/main/envs/r_packages.txt | grep -v "#")
+echo "Installing recommended Python packages ..."
+inject_packages python <(curl -fsSL https://raw.githubusercontent.com/StatFunGen/pixi-setup/main/envs/python_packages.txt | grep -v "#")
+pixi clean cache -y
+
+# Install config files
+curl -fsSL https://raw.githubusercontent.com/StatFunGen/pixi-setup/main/init.sh | bash
+
+# print messages
+BB='\033[1;34m'
+NC='\033[0m'
+echo -e "${BB}Installation completed.${NC}"
+echo -e "${BB}Note: From now on you can install other R packages as needed with 'pixi global install --environment r-base ...'${NC}"
+echo -e "${BB}and Python with 'pixi global install --environment python ...'${NC}"