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fix mr.ash summary stats #801

fix mr.ash summary stats

fix mr.ash summary stats #801

Workflow file for this run

name: Continuous Integration
on:
pull_request:
paths-ignore:
- .github/*
- .gitignore
- README.md
jobs:
ci_linux-64:
name: linux-64 CI
runs-on: ubuntu-latest
env:
CODECOV_TOKEN: ${{ secrets.CODECOV_TOKEN }}
strategy:
fail-fast: false
matrix:
environment: ["r43", "r44"]
steps:
- name: Checkout pull request branch
uses: actions/checkout@v4
with:
fetch-depth: 0
- name: Create TOML from recipe
run: .github/workflows/create_toml_from_yaml.sh ${GITHUB_WORKSPACE}
- name: Setup pixi
uses: prefix-dev/setup-pixi@v0.9.2
- name: Run unit tests
run: pixi run --environment ${{ matrix.environment }} devtools_test
- name: Check unit test code coverage
if: ${{ matrix.environment == 'r44' }}
run: pixi run --environment ${{ matrix.environment }} codecov
#- name: Run R CMD CHECK
#run: pixi run rcmdcheck
#- name: Run BiocCheckGitClone
#run: pixi run bioccheck_git_clone
#- name: Run BiocCheck
#run: pixi run bioccheck
ci_osx-arm64:
name: osx-arm64 CI
runs-on: macos-14
strategy:
fail-fast: false
matrix:
environment: ["r43", "r44"]
steps:
- name: Checkout pull request branch
uses: actions/checkout@v4
with:
fetch-depth: 0
- name: Create TOML from recipe
run: .github/workflows/create_toml_from_yaml.sh ${GITHUB_WORKSPACE}
- name: Setup pixi
uses: prefix-dev/setup-pixi@v0.9.2
- name: Run unit tests
run: pixi run --environment ${{ matrix.environment }} devtools_test
#- name: Run R CMD CHECK
#run: pixi run rcmdcheck
#- name: Run BiocCheckGitClone
#run: pixi run bioccheck_git_clone
#- name: Run BiocCheck
#run: pixi run bioccheck