Make each patched file an override to use the patched version

Author: jdalton

package.json

@@ -188,14 +188,23 @@
     "overrides": {
       "@octokit/graphql": "$@octokit/graphql",
       "@octokit/request-error": "$@octokit/request-error",
+      "@rollup/plugin-commonjs": "28.0.6",
       "@socketsecurity/registry": "$@socketsecurity/registry",
       "aggregate-error": "npm:@socketregistry/aggregate-error@^1.0.14",
       "ansi-regex": "6.1.0",
+      "ansi-term": "0.0.2",
+      "blessed": "0.1.81",
+      "blessed-contrib": "4.11.0",
+      "brace-expansion": "2.0.2",
+      "bresenham": "0.0.3",
+      "drawille-blessed-contrib": "1.0.0",
+      "drawille-canvas-blessed-contrib": "0.1.3",
       "es-define-property": "npm:@socketregistry/es-define-property@^1.0.7",
       "es-set-tostringtag": "npm:@socketregistry/es-set-tostringtag@^1.0.9",
       "function-bind": "npm:@socketregistry/function-bind@^1.0.7",
       "globalthis": "npm:@socketregistry/globalthis@^1.0.7",
       "gopd": "npm:@socketregistry/gopd@^1.0.7",
+      "graceful-fs": "4.2.11",
       "has-property-descriptors": "npm:@socketregistry/has-property-descriptors@^1.0.7",
       "has-proto": "npm:@socketregistry/has-proto@^1.0.7",
       "has-symbols": "npm:@socketregistry/has-symbols@^1.0.7",
@@ -204,16 +213,21 @@
       "indent-string": "$@socketregistry/indent-string",
       "is-core-module": "npm:@socketregistry/is-core-module@^1.0.10",
       "isarray": "npm:@socketregistry/isarray@^1.0.7",
+      "lodash": "4.17.21",
+      "meow": "13.2.0",
       "npm-package-arg": "$npm-package-arg",
       "packageurl-js": "npm:@socketregistry/packageurl-js@^1.0.9",
       "path-parse": "npm:@socketregistry/path-parse@^1.0.7",
+      "rollup": "4.50.1",
       "safe-buffer": "npm:@socketregistry/safe-buffer@^1.0.8",
       "safer-buffer": "npm:@socketregistry/safer-buffer@^1.0.9",
       "semver": "$semver",
       "set-function-length": "npm:@socketregistry/set-function-length@^1.0.9",
       "shell-quote": "npm:shell-quote@^1.8.3",
       "side-channel": "npm:@socketregistry/side-channel@^1.0.9",
+      "string_decoder": "0.10.31",
       "tiny-colors": "$yoctocolors-cjs",
+      "tiny-updater": "3.5.3",
       "typedarray": "npm:@socketregistry/typedarray@^1.0.7",
       "undici": "6.21.3",
       "vite": "7.1.5",