Atomizer errors on level 3 SBML

[alubbock]

Atomizer fails with the following error when I try to run it on a small SBML level 3 model:

Traceback (most recent call last):
  File "<string>", line 68, in <module>
  File "<string>", line 58, in main
  File "/Users/travis/build/rhclark/atomizer/build/sbmlTranslator/out00-PYZ.pyz/libsbml2bngl", line 542, in analyzeFile
  File "/Users/travis/build/rhclark/atomizer/build/sbmlTranslator/out00-PYZ.pyz/libsbml2bngl", line 673, in analyzeHelper
  File "/Users/travis/build/rhclark/atomizer/build/sbmlTranslator/out00-PYZ.pyz/sbml2bngl", line 903, in getReactions
  File "/Users/travis/build/rhclark/atomizer/build/sbmlTranslator/out00-PYZ.pyz/sbml2bngl", line 699, in reduceComponentSymmetryFactors
TypeError: append() takes exactly one argument (2 given)

Here's the SBML model:

<?xml version="1.0" encoding="UTF-8"?>
<sbml xmlns="http://www.sbml.org/sbml/level3/version2/core" level="3" version="2">
  <model name="export-test">
    <listOfCompartments>
      <compartment id="default" spatialDimensions="3" size="1" constant="true"/>
    </listOfCompartments>
    <listOfSpecies>
      <species id="__s0" name="A()" compartment="default" initialAmount="0" hasOnlySubstanceUnits="true" boundaryCondition="false" constant="false"/>
    </listOfSpecies>
    <listOfParameters>
      <parameter id="kf" name="kf" value="100" constant="true"/>
    </listOfParameters>
    <listOfReactions>
      <reaction id="r0" name="r1" reversible="false">
        <listOfProducts>
          <speciesReference species="__s0" constant="true"/>
        </listOfProducts>
        <kineticLaw>
          <math xmlns="http://www.w3.org/1998/Math/MathML">
            <ci> kf </ci>
          </math>
        </kineticLaw>
      </reaction>
    </listOfReactions>
  </model>
</sbml>

Here's the same model encoded as SBML level 2, which works on atomizer without error:

<?xml version="1.0" encoding="UTF-8"?>
<sbml xmlns="http://www.sbml.org/sbml/level2/version4" level="2" version="4">
  <model name="export-test">
    <listOfCompartments>
      <compartment id="default" size="1"/>
    </listOfCompartments>
    <listOfSpecies>
      <species id="__s0" name="A()" compartment="default" initialAmount="0" hasOnlySubstanceUnits="true"/>
    </listOfSpecies>
    <listOfParameters>
      <parameter id="kf" name="kf" value="100"/>
      <parameter id="parameterId_0" constant="false"/>
    </listOfParameters>
    <listOfReactions>
      <reaction id="r0" name="r1" reversible="false" fast="false">
        <listOfProducts>
          <speciesReference species="__s0">
            <stoichiometryMath>
              <math xmlns="http://www.w3.org/1998/Math/MathML">
                <ci> parameterId_0 </ci>
              </math>
            </stoichiometryMath>
          </speciesReference>
        </listOfProducts>
        <kineticLaw>
          <math xmlns="http://www.w3.org/1998/Math/MathML">
            <ci> kf </ci>
          </math>
        </kineticLaw>
      </reaction>
    </listOfReactions>
  </model>
</sbml>

Both models were exported from Python LibSBML.

[ASinanSaglam]

I will take a look at this as soon as I can, thank you for both opening the issue and the example