biofilter/pyproject.toml at main · RitchieLab/biofilter · GitHub

1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
[tool.poetry]
name = "biofilter-loki"
version = "3.0.0"
description = "Biofilter v3 – Legacy Edition, modernized with Poetry and APSW"
authors = ["Ritchie Lab <Software_RitchieLab@pennmedicine.upenn.edu>"]
license = "MIT"
homepage = "https://ritchielab.org"
readme = "readme.md"
packages = [
    { include = "biofilter_modules" },
    { include = "loki_modules" }
]

[tool.poetry.scripts]
biofilter = "biofilter_modules.biofilter:main"
loki-build = "loki_modules.loki_build:main"

[tool.poetry.dependencies]
python = "^3.10"
apsw = "3.46.1.0"
click = "8.1.7"
iniconfig = "2.0.0"
packaging = "24.1"
platformdirs = "4.3.6"
pluggy = "1.5.0"
wget = "^3.2"

[tool.poetry.group.dev.dependencies]
black = "^24.10.0"
coverage = "^7.6.8"
pytest = "^8.3.4"
sphinx = "^8.1.3"
sphinx-rtd-theme = "^3.0.2"
tox = "^4.23.2"
sphinx-material = "^0.0.36"

[build-system]
requires = ["poetry-core"]
build-backend = "poetry.core.masonry.api"

[tool.tox]
envlist = "py310,py311,py312"