Issue
Endpoint metadata mapping step from the old database build scripts has not been propagated to the new pipeline build script:
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getEndpointMetadata<-function(data.dir){ |
Currently the pipeline has the code for the endpoint metadata mapping, but it doesn't pull the SuperEndpoint Mapping file, so it may not be generating the same output:
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def get_endpoint_metadata(filename: str) -> pd.DataFrame: |
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endpoint_details = get_endpoint_metadata( |
Tasks
Issue
Endpoint metadata mapping step from the old database build scripts has not been propagated to the new pipeline build script:
srpAnalytics/old/bmd2Samps_v2/buildv2database.R
Line 185 in a496d63
Currently the pipeline has the code for the endpoint metadata mapping, but it doesn't pull the SuperEndpoint Mapping file, so it may not be generating the same output:
srpAnalytics/src/metadata.py
Line 254 in a496d63
srpAnalytics/sampleChemMapping/map_samples_to_chemicals.py
Line 628 in a496d63
Tasks