add bert pretraining

Author: Essoz

eval_scripts/perf_benchmark/overhead-e2e/ac_bert/README.md

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+Adapted from ml-daikon-input-programs/accelerate/complete_nlp_example

eval_scripts/perf_benchmark/overhead-e2e/ac_bert/main.py

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+# Copyright 2021 The HuggingFace Inc. team. All rights reserved.
+#
+# Licensed under the Apache License, Version 2.0 (the "License");
+# you may not use this file except in compliance with the License.
+# You may obtain a copy of the License at
+#
+#     http://www.apache.org/licenses/LICENSE-2.0
+#
+# Unless required by applicable law or agreed to in writing, software
+# distributed under the License is distributed on an "AS IS" BASIS,
+# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+# See the License for the specific language governing permissions and
+# limitations under the License.
+import argparse
+import os
+import time
+
+import evaluate
+import torch
+from accelerate import Accelerator, DataLoaderConfiguration, DistributedType
+from datasets import load_dataset
+from torch.optim import AdamW
+from torch.utils.data import DataLoader
+from transformers import (
+    AutoModelForSequenceClassification,
+    AutoTokenizer,
+    get_linear_schedule_with_warmup,
+    set_seed,
+)
+
+MD_BATCH_FILE_NAME = "iteration_times.txt"
+with open(MD_BATCH_FILE_NAME, "w") as f:
+    f.write("")
+
+########################################################################
+# This is a fully working simple example to use Accelerate
+#
+# This example trains a Bert base model on GLUE MRPC
+# in any of the following settings (with the same script):
+#   - single CPU or single GPU
+#   - multi GPUS (using PyTorch distributed mode)
+#   - (multi) TPUs
+#   - fp16 (mixed-precision) or fp32 (normal precision)
+#
+# This example also demonstrates the checkpointing and sharding capabilities
+#
+# To run it in each of these various modes, follow the instructions
+# in the readme for examples:
+# https://github.com/huggingface/accelerate/tree/main/examples
+#
+########################################################################
+
+
+MAX_GPU_BATCH_SIZE = 16
+EVAL_BATCH_SIZE = 32
+
+
+def training_function(config, args):
+    # Initialize accelerator
+    dataloader_config = DataLoaderConfiguration(
+        use_stateful_dataloader=args.use_stateful_dataloader
+    )
+    if args.with_tracking:
+        accelerator = Accelerator(
+            cpu=args.cpu,
+            mixed_precision=args.mixed_precision,
+            dataloader_config=dataloader_config,
+            log_with="all",
+            project_dir=args.project_dir,
+        )
+    else:
+        accelerator = Accelerator(
+            cpu=args.cpu,
+            mixed_precision=args.mixed_precision,
+            dataloader_config=dataloader_config,
+        )
+
+    if hasattr(args.checkpointing_steps, "isdigit"):
+        if args.checkpointing_steps == "epoch":
+            checkpointing_steps = args.checkpointing_steps
+        elif args.checkpointing_steps.isdigit():
+            checkpointing_steps = int(args.checkpointing_steps)
+        else:
+            raise ValueError(
+                f"Argument `checkpointing_steps` must be either a number or `epoch`. `{args.checkpointing_steps}` passed."
+            )
+    else:
+        checkpointing_steps = None
+    # Sample hyper-parameters for learning rate, batch size, seed and a few other HPs
+    lr = config["lr"]
+    num_epochs = int(config["num_epochs"])
+    seed = int(config["seed"])
+    batch_size = int(config["batch_size"])
+
+    # We need to initialize the trackers we use, and also store our configuration
+    if args.with_tracking:
+        run = os.path.split(__file__)[-1].split(".")[0]
+        accelerator.init_trackers(run, config)
+
+    tokenizer = AutoTokenizer.from_pretrained("bert-base-cased")
+    datasets = load_dataset("glue", "mrpc")
+    metric = evaluate.load("glue", "mrpc")
+
+    def tokenize_function(examples):
+        # max_length=None => use the model max length (it's actually the default)
+        outputs = tokenizer(
+            examples["sentence1"],
+            examples["sentence2"],
+            truncation=True,
+            max_length=None,
+        )
+        return outputs
+
+    # Apply the method we just defined to all the examples in all the splits of the dataset
+    # starting with the main process first:
+    with accelerator.main_process_first():
+        tokenized_datasets = datasets.map(
+            tokenize_function,
+            batched=True,
+            remove_columns=["idx", "sentence1", "sentence2"],
+        )
+
+    # We also rename the 'label' column to 'labels' which is the expected name for labels by the models of the
+    # transformers library
+    tokenized_datasets = tokenized_datasets.rename_column("label", "labels")
+
+    # If the batch size is too big we use gradient accumulation
+    gradient_accumulation_steps = 1
+    if (
+        batch_size > MAX_GPU_BATCH_SIZE
+        and accelerator.distributed_type != DistributedType.XLA
+    ):
+        gradient_accumulation_steps = batch_size // MAX_GPU_BATCH_SIZE
+        batch_size = MAX_GPU_BATCH_SIZE
+
+    def collate_fn(examples):
+        # On TPU it's best to pad everything to the same length or training will be very slow.
+        max_length = (
+            128 if accelerator.distributed_type == DistributedType.XLA else None
+        )
+        # When using mixed precision we want round multiples of 8/16
+        if accelerator.mixed_precision == "fp8":
+            pad_to_multiple_of = 16
+        elif accelerator.mixed_precision != "no":
+            pad_to_multiple_of = 8
+        else:
+            pad_to_multiple_of = None
+
+        return tokenizer.pad(
+            examples,
+            padding="longest",
+            max_length=max_length,
+            pad_to_multiple_of=pad_to_multiple_of,
+            return_tensors="pt",
+        )
+
+    # Instantiate dataloaders.
+    train_dataloader = DataLoader(
+        tokenized_datasets["train"],
+        shuffle=True,
+        collate_fn=collate_fn,
+        batch_size=batch_size,
+    )
+    eval_dataloader = DataLoader(
+        tokenized_datasets["validation"],
+        shuffle=False,
+        collate_fn=collate_fn,
+        batch_size=EVAL_BATCH_SIZE,
+    )
+
+    set_seed(seed)
+
+    # Instantiate the model (we build the model here so that the seed also control new weights initialization)
+    model = AutoModelForSequenceClassification.from_pretrained(
+        "bert-base-cased", return_dict=True
+    )
+
+    # We could avoid this line since the accelerator is set with `device_placement=True` (default value).
+    # Note that if you are placing tensors on devices manually, this line absolutely needs to be before the optimizer
+    # creation otherwise training will not work on TPU (`accelerate` will kindly throw an error to make us aware of that).
+    model = model.to(accelerator.device)
+
+    # Instantiate optimizer
+    optimizer = AdamW(params=model.parameters(), lr=lr)
+
+    # Instantiate scheduler
+    lr_scheduler = get_linear_schedule_with_warmup(
+        optimizer=optimizer,
+        num_warmup_steps=100,
+        num_training_steps=(len(train_dataloader) * num_epochs)
+        // gradient_accumulation_steps,
+    )
+
+    # Prepare everything
+    # There is no specific order to remember, we just need to unpack the objects in the same order we gave them to the
+    # prepare method.
+    model, optimizer, train_dataloader, eval_dataloader, lr_scheduler = (
+        accelerator.prepare(
+            model, optimizer, train_dataloader, eval_dataloader, lr_scheduler
+        )
+    )
+
+    # We need to keep track of how many total steps we have iterated over
+    overall_step = 0
+    # We also need to keep track of the stating epoch so files are named properly
+    starting_epoch = 0
+
+    # Potentially load in the weights and states from a previous save
+    if args.resume_from_checkpoint:
+        if args.resume_from_checkpoint is not None or args.resume_from_checkpoint != "":
+            accelerator.print(f"Resumed from checkpoint: {args.resume_from_checkpoint}")
+            accelerator.load_state(args.resume_from_checkpoint)
+            path = os.path.basename(args.resume_from_checkpoint)
+        else:
+            # Get the most recent checkpoint
+            dirs = [f.name for f in os.scandir(os.getcwd()) if f.is_dir()]
+            dirs.sort(key=os.path.getctime)
+            path = dirs[
+                -1
+            ]  # Sorts folders by date modified, most recent checkpoint is the last
+        # Extract `epoch_{i}` or `step_{i}`
+        training_difference = os.path.splitext(path)[0]
+
+        if "epoch" in training_difference:
+            starting_epoch = int(training_difference.replace("epoch_", "")) + 1
+            resume_step = None
+        else:
+            resume_step = int(training_difference.replace("step_", ""))
+            starting_epoch = resume_step // len(train_dataloader)
+            resume_step -= starting_epoch * len(train_dataloader)
+
+    # Now we train the model
+    for epoch in range(starting_epoch, num_epochs):
+        model.train()
+        if args.with_tracking:
+            total_loss = 0
+        if (
+            args.resume_from_checkpoint
+            and epoch == starting_epoch
+            and resume_step is not None
+        ):
+            # We need to skip steps until we reach the resumed step
+            if not args.use_stateful_dataloader:
+                active_dataloader = accelerator.skip_first_batches(
+                    train_dataloader, resume_step
+                )
+            else:
+                active_dataloader = train_dataloader
+            overall_step += resume_step
+        else:
+            # After the first iteration though, we need to go back to the original dataloader
+            active_dataloader = train_dataloader
+        for step, batch in enumerate(active_dataloader):
+            # We could avoid this line since we set the accelerator with `device_placement=True`.
+            BATCH_START = time.perf_counter()
+
+            batch.to(accelerator.device)
+            outputs = model(**batch)
+            loss = outputs.loss
+            loss = loss / gradient_accumulation_steps
+            # We keep track of the loss at each epoch
+            if args.with_tracking:
+                total_loss += loss.detach().float()
+            accelerator.backward(loss)
+            if step % gradient_accumulation_steps == 0:
+                optimizer.step()
+                lr_scheduler.step()
+                optimizer.zero_grad()
+
+            overall_step += 1
+
+            if isinstance(checkpointing_steps, int):
+                output_dir = f"step_{overall_step}"
+                if overall_step % checkpointing_steps == 0:
+                    if args.output_dir is not None:
+                        output_dir = os.path.join(args.output_dir, output_dir)
+                    accelerator.save_state(output_dir)
+
+            BATCH_END = time.perf_counter()
+            with open(MD_BATCH_FILE_NAME, "a") as f:
+                f.write("%s\n" % (BATCH_END - BATCH_START))
+        model.eval()
+        for step, batch in enumerate(eval_dataloader):
+            # We could avoid this line since we set the accelerator with `device_placement=True`.
+            batch.to(accelerator.device)
+            with torch.no_grad():
+                outputs = model(**batch)
+            predictions = outputs.logits.argmax(dim=-1)
+            predictions, references = accelerator.gather_for_metrics(
+                (predictions, batch["labels"])
+            )
+            metric.add_batch(
+                predictions=predictions,
+                references=references,
+            )
+
+        eval_metric = metric.compute()
+        # Use accelerator.print to print only on the main process.
+        accelerator.print(f"epoch {epoch}:", eval_metric)
+        if args.with_tracking:
+            accelerator.log(
+                {
+                    "accuracy": eval_metric["accuracy"],
+                    "f1": eval_metric["f1"],
+                    "train_loss": total_loss.item() / len(train_dataloader),
+                    "epoch": epoch,
+                },
+                step=epoch,
+            )
+
+        if checkpointing_steps == "epoch":
+            output_dir = f"epoch_{epoch}"
+            if args.output_dir is not None:
+                output_dir = os.path.join(args.output_dir, output_dir)
+            accelerator.save_state(output_dir)
+
+    accelerator.end_training()
+
+
+def main():
+    parser = argparse.ArgumentParser(description="Simple example of training script.")
+    parser.add_argument(
+        "--mixed_precision",
+        type=str,
+        default=None,
+        choices=["no", "fp16", "bf16", "fp8"],
+        help="Whether to use mixed precision. Choose"
+        "between fp16 and bf16 (bfloat16). Bf16 requires PyTorch >= 1.10."
+        "and an Nvidia Ampere GPU.",
+    )
+    parser.add_argument(
+        "--cpu", action="store_true", help="If passed, will train on the CPU."
+    )
+    parser.add_argument(
+        "--checkpointing_steps",
+        type=str,
+        default=None,
+        help="Whether the various states should be saved at the end of every n steps, or 'epoch' for each epoch.",
+    )
+    parser.add_argument(
+        "--resume_from_checkpoint",
+        type=str,
+        default=None,
+        help="If the training should continue from a checkpoint folder.",
+    )
+    parser.add_argument(
+        "--use_stateful_dataloader",
+        action="store_true",
+        help="If the dataloader should be a resumable stateful dataloader.",
+    )
+    parser.add_argument(
+        "--with_tracking",
+        action="store_true",
+        help="Whether to load in all available experiment trackers from the environment and use them for logging.",
+    )
+    parser.add_argument(
+        "--output_dir",
+        type=str,
+        default=".",
+        help="Optional save directory where all checkpoint folders will be stored. Default is the current working directory.",
+    )
+    parser.add_argument(
+        "--project_dir",
+        type=str,
+        default="logs",
+        help="Location on where to store experiment tracking logs` and relevent project information",
+    )
+    args = parser.parse_args()
+    config = {"lr": 2e-5, "num_epochs": 3, "seed": 42, "batch_size": 16}
+    training_function(config, args)
+
+
+if __name__ == "__main__":
+    main()