Detecting fusions in intergenic regions

[salhajh]

Hello.

I know that genefuse is built to focus on detecting fusions within genic regions, however I was wondering if it was possible to detect outside of those regions (i.e. IGH regions) through some alterations to the script? I have created a file with coordinates (as per the examples given) that cover the regions I am interested in and which does appear on IGV to have a gene fusion within that region, however it has not been able to call it. I was wondering if that was a possibility?

Thank you!