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plot_figures.py
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347 lines (308 loc) · 15.5 KB
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# %% [markdown]
# ## Import libraries
# %%
import os
import matplotlib.pyplot as plt
import json
import os
from statistics import mean
import numpy as np
import shutil
# %%
def read_metrics(run_folder_path):
folders = os.listdir(run_folder_path)
results_dict = dict((trainer_type, {
'Random': {'iter_accuracy': [],
'iter_recall': [],
'iter_precision': [],
'iter_f1': [],
'iter_accuracy_converged': [],
'iter_recall_converged': [],
'iter_precision_converged': [],
'iter_f1_converged': [],
'iter_mae_ground_model_error': [],
'iter_mae_trainer_model_error': []
},
'ActiveLR': {'iter_accuracy': [],
'iter_recall': [],
'iter_precision': [],
'iter_f1': [],
'iter_accuracy_converged': [],
'iter_recall_converged': [],
'iter_precision_converged': [],
'iter_f1_converged': [],
'iter_mae_ground_model_error': [],
'iter_mae_trainer_model_error': []
},
'StochasticBR': {'iter_accuracy': [],
'iter_recall': [],
'iter_precision': [],
'iter_f1': [],
'iter_accuracy_converged': [],
'iter_recall_converged': [],
'iter_precision_converged': [],
'iter_f1_converged': [],
'iter_mae_ground_model_error': [],
'iter_mae_trainer_model_error': []
},
'StochasticUS': {'iter_accuracy': [],
'iter_recall': [],
'iter_precision': [],
'iter_f1': [],
'iter_accuracy_converged': [],
'iter_recall_converged': [],
'iter_precision_converged': [],
'iter_f1_converged': [],
'iter_mae_ground_model_error': [],
'iter_mae_trainer_model_error': []
}
}) for trainer_type in ['full-oracle', 'learning-oracle', 'bayesian'])
for folder in folders:
try:
trainer_type, sampling_method, _ = folder.split("_")
with open(os.path.join(run_folder_path, folder, "study_metrics.json"), 'r') as fp:
study_metrics = json.load(fp)
for metric_type in ['iter_accuracy',
'iter_recall',
'iter_precision',
'iter_f1',
'iter_mae_ground_model_error',
'iter_mae_trainer_model_error',
'iter_accuracy_converged',
'iter_recall_converged',
'iter_precision_converged',
'iter_f1_converged']:
folder_name = None
if sampling_method == 'RANDOM':
folder_name = 'Random'
elif sampling_method == 'ACTIVELR':
folder_name = 'ActiveLR'
elif sampling_method == 'STOCHASTICBR':
folder_name = 'StochasticBR'
elif sampling_method == 'STOCHASTICUS':
folder_name = 'StochasticUS'
results_dict[trainer_type][folder_name][metric_type].append([list(range(1, len(
study_metrics[metric_type])+1)), study_metrics['elapsed_time'], study_metrics[metric_type]])
except Exception as e:
print(e)
return results_dict
def compute_average_metrics(results_dict):
'''For Random'''
average_dict = dict((trainer_type, {
'Random': {'iter_accuracy': [],
'iter_recall': [],
'iter_precision': [],
'iter_f1': [],
'iter_accuracy_converged': [],
'iter_recall_converged': [],
'iter_precision_converged': [],
'iter_f1_converged': [],
'iter_mae_ground_model_error': [],
'iter_mae_trainer_model_error': []
},
'ActiveLR': {'iter_accuracy': [],
'iter_recall': [],
'iter_precision': [],
'iter_f1': [],
'iter_accuracy_converged': [],
'iter_recall_converged': [],
'iter_precision_converged': [],
'iter_f1_converged': [],
'iter_mae_ground_model_error': [],
'iter_mae_trainer_model_error': []
},
'StochasticBR': {'iter_accuracy': [],
'iter_recall': [],
'iter_precision': [],
'iter_f1': [],
'iter_accuracy_converged': [],
'iter_recall_converged': [],
'iter_precision_converged': [],
'iter_f1_converged': [],
'iter_mae_ground_model_error': [],
'iter_mae_trainer_model_error': []
},
'StochasticUS': {'iter_accuracy': [],
'iter_recall': [],
'iter_precision': [],
'iter_f1': [],
'iter_accuracy_converged': [],
'iter_recall_converged': [],
'iter_precision_converged': [],
'iter_f1_converged': [],
'iter_mae_ground_model_error': [],
'iter_mae_trainer_model_error': []
}
}) for trainer_type in ['full-oracle', 'learning-oracle', 'bayesian'])
for trainer_type in ['full-oracle', 'learning-oracle', 'bayesian']:
for sampling_type in ['Random', 'ActiveLR', 'StochasticBR', 'StochasticUS']:
for metric_type in ['iter_accuracy', 'iter_recall',
'iter_precision', 'iter_f1',
'iter_accuracy_converged',
'iter_recall_converged',
'iter_precision_converged',
'iter_f1_converged',
'iter_mae_ground_model_error',
'iter_mae_trainer_model_error']:
try:
for exp_metrics_lst in zip(*results_dict[trainer_type][sampling_type][metric_type]):
average_lst = []
# print(exp_metrics_lst)
max_len = max(len(exp_metric)
for exp_metric in exp_metrics_lst)
# print(max_len)
for idx in range(max_len):
candidate_lst = [exp_metric[idx] for exp_metric in exp_metrics_lst if idx < len(
exp_metric) and str(exp_metric[idx]) != 'nan']
if candidate_lst:
average_lst.append(mean(candidate_lst))
else:
average_lst.append(np.nan)
average_dict[trainer_type][sampling_type][metric_type].append(
average_lst)
except Exception as e:
print(e)
return average_dict
def print_metrics(run_folder_path, print_intervals=[0, 0.1, 0.5, 0.9, 1.0]):
try:
'''Read run folder'''
results_dict = read_metrics(run_folder_path=run_folder_path)
'''Compute average dict'''
average_dict = compute_average_metrics(results_dict=results_dict)
prior_type = run_folder_path.split("/")[-1]
print("*****************************************************************************")
print(f"Prior Type: {prior_type}")
print("*****************************************************************************")
for trainer_type in ['bayesian']:
for metric in ['accuracy_converged',
'recall_converged',
'precision_converged',
'f1_converged']:
print(
f"Trainer Type: {trainer_type} Metric: {metric}")
for interval in print_intervals:
print_str = "Iteration Fraction: %.2f "%round(interval,2)
for sampling_method in average_dict[trainer_type]:
total_iter = len(
average_dict[trainer_type][sampling_method][f'iter_{metric}'][0])-1
if total_iter < 0:
continue
iter = int(total_iter*interval)
print_str += f"{sampling_method}: %.2f "%round(average_dict[trainer_type][sampling_method][f'iter_{metric}'][2][iter], 3)
print(print_str)
print("-------------------------------------------------------------------")
print("========================================================================")
except Exception as e:
print(e)
def plot_figures(run_folder_path):
'''Read run folder'''
results_dict = read_metrics(run_folder_path=run_folder_path)
'''Compute average dict'''
average_dict = compute_average_metrics(results_dict=results_dict)
figures = []
figure_names = []
for metric in ['accuracy',
'recall',
'precision',
'f1',
'accuracy_converged',
'recall_converged',
'precision_converged',
'f1_converged',
'mae_ground_model_error',
'mae_trainer_model_error']:
# for metric in ['mae_trainer_model_error', 'mae_ground_model_error']:
for trainer_type in ['bayesian']:
fig = plt.figure(figsize=(6, 4))
for sampling_method in average_dict[trainer_type]:
if len(average_dict[trainer_type][sampling_method][f'iter_{metric}']) != 0 and len(average_dict[trainer_type][sampling_method][f'iter_{metric}'][0]) != 0 and len(average_dict[trainer_type][sampling_method][f'iter_{metric}'][2]) !=0:
x_vals = average_dict[trainer_type][sampling_method][f'iter_{metric}'][0]
y_vals = average_dict[trainer_type][sampling_method][f'iter_{metric}'][2]
# if len(x_vals) > 30:
# x_vals = x_vals[:30]
# if len(y_vals) > 30:
# y_vals = y_vals[:30]
plt.plot(x_vals, y_vals, label='US' if sampling_method == "ActiveLR" else sampling_method)
plt.xlabel('Iterations')
if metric == 'mae_ground_model_error':
plt.ylabel("Mean Absolute Error(MAE)")
# plt.title(
# "Difference between Ground Model and Learner Model")
elif metric == 'mae_trainer_model_error':
plt.ylabel("Mean Absolute Error(MAE)")
# plt.title(
# "Difference between Trainer Model and Learner Model")
elif "f1" in metric:
plt.ylabel("F1 Score")
elif "precision" in metric:
plt.ylabel("Precision")
elif "recall" in metric:
plt.ylabel("Recall")
else:
plt.ylabel(metric)
# plt.title(
# "Predictions between the Learner and the Ground Truth Model")
plt.ylim(bottom=0)
plt.legend()
plt.tight_layout()
figures.append(fig)
figure_names.append(f'{trainer_type}_{metric}.png')
return figures, figure_names
# %%
if __name__ == "__main__":
project_name = os.getenv("PROJECT_NAME", None)
base_project_dir = os.path.dirname(
os.path.abspath(__file__))
if project_name is None:
base_run_dir = os.path.join(base_project_dir, 'learner', 'store')
fig_save_base_dir = os.path.join(base_project_dir, 'figures')
else:
base_run_dir = os.path.join("/data/shresthr", project_name, "store")
fig_save_base_dir = os.path.join("/data/shresthr", project_name, "figures")
data_save_base_dir = os.path.join("/data/shresthr", project_name, "data")
'''Create data directory'''
if os.path.exists(data_save_base_dir):
shutil.rmtree(data_save_base_dir)
os.makedirs(data_save_base_dir)
'''Copy new_scenarios, trainer_model and preprocessed files'''
shutil.copyfile("./scenarios.json", os.path.join("/data/shresthr", project_name,"data/scenarios.json"))
shutil.copyfile("./new_scenarios.json", os.path.join("/data/shresthr", project_name,"data/new_scenarios.json"))
shutil.copyfile("./trainer_model.json", os.path.join("/data/shresthr", project_name,"data/trainer_model.json"))
shutil.copytree("./data/preprocessed-data", os.path.join("/data/shresthr", project_name,"data/preprocessed-data"))
os.makedirs(fig_save_base_dir, exist_ok=True)
for dataset in ['airport', 'omdb', 'hospital', 'tax']:
print(dataset)
for use_val_data in ['True', 'False']:
dir1 = os.path.join(
base_run_dir, f"dataset={dataset}", f"use_val_data={use_val_data}")
if not os.path.exists(dir1):
print(f"Directory doesn't exist: {base_run_dir}")
continue
'''Loop into the dirty proportion folders'''
proportion_folders = [fold for fold in os.listdir(
dir1) if "dirty-proportion=" in fold]
for prop_folder in proportion_folders:
dir2 = os.path.join(dir1, prop_folder)
dirty_proportion = prop_folder.replace("dirty-proportion=", "")
'''Loop into the prior functions'''
prior_folders = [fold for fold in os.listdir(
dir2) if "trainer-prior-type=" in fold and "learner-prior-type=" in fold]
for prior_folder in prior_folders:
trainer_prior_type, learner_prior_type = prior_folder.replace(
"-learner-prior-type=", "_learner-prior-type=").split("_")
run_dir = os.path.join(dir2, prior_folder)
figures, figure_names = plot_figures(run_dir)
print_metrics(run_dir)
fig_save_dir = os.path.join(
fig_save_base_dir,
f"dataset={dataset}",
f"use_val_data={use_val_data}",
prop_folder,
f"{trainer_prior_type}_{learner_prior_type}")
os.makedirs(fig_save_dir, exist_ok=True)
for fig, fig_name in zip(figures, figure_names):
figure_save_path = os.path.join(fig_save_dir, fig_name)
print(f"Saving figure into {figure_save_path}...")
fig.savefig(figure_save_path)
plt.close('all')
# %%