unix_tutorial/mkdocs.yml at main · NevadaINBRE/unix_tutorial · GitHub

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site_name: Nevada Bioinformatics Center - Unix Workshop
site_url: https://nevadainbre.github.io/unix_tutorial/

repo_name: NevadaINBRE/unix_tutorial
repo_url: https://github.com/NevadaINBRE/unix_tutorial
edit_uri: edit/main/docs/

theme:
  name: material
  logo: images/university-logo.svg
  favicon: images/university-logo.svg
  palette:
    primary: custom
    accent: blue
  features:
    - content.code.copy
    - content.code.annotate
    - navigation.top
    - navigation.footer

copyright: Copyright &copy; 2026 University of Nevada, Reno

extra_css:
  - stylesheets/custom.css

markdown_extensions:
  - admonition
  - pymdownx.details
  - pymdownx.superfences
  - pymdownx.tabbed:
      alternate_style: true
  - pymdownx.highlight:
      anchor_linenums: true

extra:
  version:
    provider: mike

nav:
  - Welcome: index.md
  - Day 1 - Beginner UNIX:
    - Introduction: anatomy.md
    - Navigation & Pathing: navigation.md
    - Software Installation: conda.md
    - Working with Files: files.md
    - Downloading & Compression: data.md
    - Advanced Tools & Wrap-up: advanced.md
  - Day 2 - Intermediate UNIX:
    - Intro & File Management: file_management.md
    - Text Processing: text_processing.md
    - Shell Scripting: shell_scripting.md
    - Remote Computing: remote_computing.md
    - Recap & Cheat Sheets: intermediate_wrapup.md