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RCSB Search API: rcsb_cluster_membership -> 100 identity but with different pdbx_seq_one_letter_code #6

@NatureGeorge

Description

@NatureGeorge

Describe the bug

as title said

To Reproduce

PDB('2d4q').rcsb_cluster_membership(entity_id=1, identity_cutoff=100).result()
rcsb_id score cluster_id identity pdb_id entity_id
0 2D4Q_1 1.0 34283 100 2d4q 1
1 2E2X_1 1.0 34283 100 2e2x 1
>>> PDB('2d4q').get_sequence(entity_id=1, mode='raw_pdb_seq').result()
>>> 'KEEFKALKTLSIFYQAGTSKAGNPIFYYVARRFKTGQINGDLLIYHVLLTLKPYYAKPYEIVVDLTHTGPSNRFKTDFLSKWFVVFPGFAYDNVSAVYIYNCNSWVREYTKYHERLLTGLKGSKRLVFIDCPGKLAEHIEHEQQKLPAATLALEEDLKVFHNALKLAHKDTKVSIKVGSTAVQVTSAERTKVLGQSVFLNDIYYASEIEEICLVDENQFTLTIANQGTPLTFMHQECEAIVQSIIHIRTRWELSQPD'
>>> PDB('2e2x').get_sequence(entity_id=1, mode='raw_pdb_seq').result()
>>> 'GAMTGSSKFEEFMTRHQVHEKEEFKALKTLSIFYQAGTSKAGNPIFYYVARRFKTGQINGDLLIYHVLLTLKPYYAKPYEIVVDLTHTGPSNRFKTDFLSKWFVVFPGFAYDNVSAVYIYNCNSWVREYTKYHERLLTGLKGSKRLVFIDCPGKLAEHIEHEQQKLPAATLALEEDLKVFHNALKLAHKDTKVSIKVGSTAVQVTSAERTKVLGQSVFLNDIYYASEIEEICLVDENQFTLTIANQGTPLTFMHQECEAIVQSIIHIRTRWELSQPD'
>>> PDB('2e2x').stats_protein_entity_seq().result()[0].ARTIFACT_INDEX
>>> [[1, 5]]

Expected behavior

same pdbx_seq_one_letter_code


  • Version [0.2.6]

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