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search_post_document_reference.py
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146 lines (126 loc) · 5.31 KB
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from pydantic import ValidationError
from nrlf.consumer.fhir.r4.model import Bundle, DocumentReference
from nrlf.core.codes import SpineErrorConcept
from nrlf.core.config import Config
from nrlf.core.decorators import request_handler
from nrlf.core.dynamodb.repository import DocumentPointerRepository
from nrlf.core.logger import LogReference, logger
from nrlf.core.model import ConnectionMetadata, ConsumerRequestParams
from nrlf.core.response import Response, SpineErrorResponse
from nrlf.core.validators import validate_category, validate_type
from nrlf.producer.fhir.r4.model import OperationOutcome, OperationOutcomeIssue
@request_handler(body=ConsumerRequestParams)
def handler(
body: ConsumerRequestParams,
metadata: ConnectionMetadata,
repository: DocumentPointerRepository,
) -> Response:
"""
Search for document references based on the provided parameters.
Args:
body (ConsumerRequestParams): The request parameters for the search.
metadata (ConnectionMetadata): The metadata containing pointer types.
repository (DocumentPointerRepository): The repository for document pointers.
Returns:
Response: The response containing the search results.
Raises:
SpineErrorResponse.INVALID_NHS_NUMBER: If a valid NHS number is not provided.
SpineErrorResponse.INVALID_CODE_SYSTEM: If the provided type system is invalid.
OperationOutcomeError: If an error occurs while parsing the document reference.
"""
logger.log(LogReference.CONPOSTSEARCH000)
if not body.nhs_number:
logger.log(
LogReference.CONPOSTSEARCH001, subject_identifier=body.subject_identifier
)
return SpineErrorResponse.INVALID_NHS_NUMBER(
diagnostics="A valid NHS number is required to search for document references",
expression="subject:identifier",
)
config = Config()
base_url = f"https://{config.ENVIRONMENT}.api.service.nhs.uk/"
self_link = f"{base_url}record-locator/consumer/FHIR/R4/DocumentReference?subject:identifier=https://fhir.nhs.uk/Id/nhs-number|{body.nhs_number}"
if not validate_type(body.type, metadata.pointer_types):
logger.log(
LogReference.CONPOSTSEARCH002,
type=body.type,
pointer_types=metadata.pointer_types,
)
return SpineErrorResponse.INVALID_CODE_SYSTEM(
diagnostics="The provided type does not match the allowed types for this organisation",
expression="type",
)
categories = body.category.root.split(",") if body.category else []
if not validate_category(categories):
logger.log(
LogReference.CONPOSTSEARCH002b,
category=body.category,
) # TODO - Should update error message once permissioning by category is implemented
return SpineErrorResponse.INVALID_CODE_SYSTEM(
diagnostics="The provided category is not valid",
expression="category",
)
custodian_id = (
body.custodian_identifier.root.split("|", maxsplit=1)[1]
if body.custodian_identifier
else None
)
if custodian_id:
self_link += f"&custodian:identifier=https://fhir.nhs.uk/Id/ods-organization-code|{custodian_id}"
pointer_types = [body.type.root] if body.type else metadata.pointer_types
if body.type:
self_link += f"&type={body.type.root}"
if body.category:
self_link += f"&category={body.category.root}"
bundle = {
"resourceType": "Bundle",
"type": "searchset",
"link": [{"relation": "self", "url": self_link}],
"total": 0,
"entry": [],
}
logger.log(
LogReference.CONPOSTSEARCH003,
nhs_number=body.nhs_number,
custodian_id=custodian_id,
pointer_types=pointer_types,
)
for result in repository.search(
nhs_number=body.nhs_number,
custodian=custodian_id,
pointer_types=pointer_types,
categories=categories,
):
try:
document_reference = DocumentReference.model_validate_json(result.document)
bundle["total"] += 1
bundle["entry"].append(
{"resource": document_reference.model_dump(exclude_none=True)}
)
logger.log(
LogReference.CONPOSTSEARCH004,
id=document_reference.id,
count=bundle["total"],
)
except ValidationError as exc:
logger.log(
LogReference.CONPOSTSEARCH005, error=str(exc), document=result.document
)
operation_outcome = OperationOutcome(
resourceType="OperationOutcome",
issue=[
OperationOutcomeIssue(
severity="error",
code="exception",
details=SpineErrorConcept.from_code("INTERNAL_SERVER_ERROR"),
diagnostics="An error occurred whilst parsing the document reference search results",
)
],
)
bundle["total"] += 1
bundle["entry"].append(
{"resource": operation_outcome.model_dump(exclude_none=True)}
)
response = Response.from_resource(Bundle.model_validate(bundle))
logger.log(LogReference.CONPOSTSEARCH999)
return response