installation.md

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Installation

To install scarecrow first create a conda/mamba environment. After creating the environment, activate it, and install the dependencies.

mamba create --name scarecrow python=3.12
mamba activate scarecrow
pip install git+https://github.com/MorganResearchLab/scarecrow.git

Whenever using scarecrow ensure that the environment is first activated (mamba activate scarecrow).