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basenetpico3.ode.set3
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351 lines (349 loc) · 5.45 KB
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## Set file for basenetpico3.ode on Mon Apr 2 11:27:39 2018
23 Number of equations and auxiliaries
73 Number of parameters
# Numerical stuff
1 nout
40 nullcline mesh
8 Qual RK
10000 total
0.1 DeltaT
0 T0
0 Transient
5000 Bound
1e-12 DtMin
1 DtMax
0.001 Tolerance
0.001 Abs. Tolerance
0 Max Delay
100 Eigenvector iterates
0.001 Eigenvector tolerance
0.001 Newton tolerance
0 Poincare plane
1e-05 Boundary value tolerance
1e-05 Boundary value epsilon
20 Boundary value iterates
0 Poincare None
1 Poincare variable
1 Poincare sign
0 Stop on Section
0 Delay flag
10000 Current time
10000 Last Time
1 MyStart
1 INFLAG
# Delays
0.0
0.0
0.0
0.0
0.0
0.0
0.0
0.0
0.0
0.0
0.0
0.0
0.0
# Bndry conds
0
0
0
0
0
0
0
0
0
0
0
0
0
# Old ICs
-66.72047402539444 V1
-58.45301729085097 V2
-24.48108237102182 V3
-59.18111325030944 V4
-14.8335152673346 V5
0.344848037132666 H1
0.2083623846905638 H2
0.4522269480122016 H3
0.4143615497844623 H4
0.7150382434491885 H5
0.2687545729226485 M2
0.1529385460014474 M3
0.04201480104286515 M4
# Ending ICs
-25.85411358575036 V1
-27.58097985903005 V2
-60.66883562650489 V3
-51.97695158927019 V4
-67.63803039967665 V5
0.3861447085158601 H1
0.2042883421630558 H2
0.4304762227046617 H3
0.3749886328413965 H4
0.7810047570630377 H5
0.2480453778770985 M2
0.08840305005318479 M3
0.05455146123482853 M4
# Parameters
20 C
3 gLE
3.25 gLI
-65 ELE
-60 ELI
10 gsynE
0 EsynE
60 gsynI
-75 EsynI
-85 EK
50 ENa
-29 V12n
-4 kn
1 gKdr
-37 V12mp
-6 kmp
-48 V12hp
8 khp
4000 tauhp
4.5 gNaPe
0.25 gNaPi
10 gAD
2000 Tad2
1500 Tad3
2000 Tad4
0.8 Kad2
1.4 Kad3
0.8 Kad4
-32 V12outpute
-8 Koutpute
-30 V12outputi
-4 Koutputi
-20 V12outputp
-12 Koutputp
0.6 a12
0.6 b23
0.3 b24
0.125 b31
0.27 b32
0.45 b34
0.015 b41
0.3 b42
0.02 b43
1 Drive1
1 Drive2
1 Drive3
-0.03 c11
0.19 c12
0.58 c13
0.2 c14
0.07000000000000001 c21
0.3 c22
0.4 c24
0.025 c31
1 nf
0 sdum1
0 sdum2
0 sdum3
0 sdum4
0 edum
0 Iapp1
0 Iapp2
0 Iapp3
0 Iapp4
0.2 b25
0.3 b45
0 sdum5
0.045 c15
0 c25
0 c35
0 Iapp5
0.1 a53
0.2 a15
# Graphics
0.7071097251469876 rm
-0.4999999999826661 rm
0.4999958366025516 rm
0.7071038372138505 rm
0.5000041633974482 rm
-0.4999999999826661 rm
0 rm
0.7071038372138505 rm
0.7071097251469876 rm
0
21
1
1
0
0
22
1
1
10
0
21
1
1
8
0
22
1
1
10
0
23
1
1
5
0
1
1
1
0
0
1
1
1
0
0
1
1
1
0
0
1
1
1
0
0
1
1
1
0
-1000
1000
0
0 3DFlag
1 Timeflag
0 Colorflag
0 Type
1 color scale
0 minscale
10000 xmax
0 xmin
0.8113813996315002 ymax
0.0001830505207180977 ymin
12 zmax
-12 zmin
5000
0.0002
0.4057822250761092
2.465488252278072
0
0.08333333333333333
45 Theta
45 Phi
0 xshft
0 yshft
0 zshft
0 xlo
0.0001830505207180977 ylo
0
-80
10000 xhi
0.8113813996315002 yhi
1000
20
# Transpose variables etc
V1
2 n columns
1 n rows
1 row skip
1 col skip
1 row 0
# Coupling stuff for H funs
0
0
0
0
0
0
0
0
0
0
0
# Array plot stuff
# Array plot stuff
0 Row 1
50 NCols
8 Row 1
0 NRows
1 RowSkip
0 Zmin
0 Zmax
# Torus information
0 Torus flag 1=ON
0 Torus period
# Range information
0 shoot
0 eq-range stab col
0 shoot flag 1=on
0 eq-range steps
0 eq_range low
10 eq_range high
0 eq_rang
e high
1 Range steps
0 Cycle color 1=on
0 Reset data 1=on
0 Use old I.C.s 1=yes
0 Par1 low
20 Par2 low
0 Par1 high
0 Par2 high
1 Par1 hi
0 BVP side
1 color cycle flag 1=on
0 BVP range steps
0 BVP range low
0 BVP range high
RHS etc ...
dV1/dT=(-INAPE(V1,H1)-IKDR(V1)-ILE(V1)-GSYNI*(B31*FOUTI(V3)+B41*FOUTI(V4)+SDUM1)*(V1-ESYNI)-GSYNE*(C11*DRIVE1+C21*DRIVE2+C31*DRIVE3)*(V1-ESYNE)+IAPP1)/C
dV2/dT=(-INAPI(V2,H2)-IAD(V2,M2)-ILI(V2)-GSYNI*(B32*FOUTI(V3)+B42*FOUTI(V4)+SDUM2)*(V2-ESYNI)-GSYNE*(A12*FOUTE(V1)+C22*DRIVE2+C12*DRIVE1+EDUM)*(V2-ESYNE)+IAPP2)/C
dV3/dT=(-INAPI(V3,H3)-IAD(V3,M3)-ILI(V3)-GSYNI*(B23*FOUTI(V2)+B43*FOUTI(V4)+SDUM3)*(V3-ESYNI)-GSYNE*(A53*FOUTP(V5)+C13*DRIVE1)*(V3-ESYNE)+IAPP3)/C
dV4/dT=(-INAPI(V4,H4)-IAD(V4,M4)-ILI(V4)-GSYNI*(B24*FOUTI(V2)+B34*FOUTI(V3)+SDUM4)*(V4-ESYNI)-GSYNE*(C14*DRIVE1+C24*DRIVE2)*(V4-ESYNE)+IAPP4)/C
dV5/dT=(-INAPE(V5,H5)-IKDR(V5)-ILE(V5)-GSYNI*(B25*FOUTI(V2)+B45*FOUTI(V4)+SDUM5)*(V5-ESYNI)-GSYNE*(A15*FOUTE(V1)+C15*DRIVE1+C25*DRIVE2+C35*DRIVE3)*(V5-ESYNE)+IAPP5)/C
dH1/dT=(HPINF(V1)-H1)/TAUINF(V1)
dH2/dT=(HPINF(V2)-H2)/TAUINF(V2)
dH3/dT=(HPINF(V3)-H3)/TAUINF(V3)
dH4/dT=(HPINF(V4)-H4)/TAUINF(V4)
dH5/dT=(HPINF(V5)-H5)/TAUINF(V5)
dM2/dT=(-M2+KAD2*FOUTI(V2))/TAD2
dM3/dT=(-M3+KAD3*FOUTI(V3))/TAD3
dM4/dT=(-M4+KAD4*FOUTI(V4))/TAD4
INH1=B31*FOUTI(V3)+B41*FOUTI(V4)
INH2=B32*FOUTI(V3)+B42*FOUTI(V4)
INH3=B23*FOUTI(V2)+B43*FOUTI(V4)
INH4=B24*FOUTI(V2)+B34*FOUTI(V3)
EXC2=A12*FOUTE(V1)
FV1=FOUTE(V1)
FV2=FOUTI(V2)
FV3=FOUTI(V3)
FV4=FOUTI(V4)
FV5=FOUTE(V5)
User-defined functions:
FOUTE(V) = 1./(1+EXP((V-V12OUTPUTE)/KOUTPUTE))
FOUTI(V) = 1./(1+EXP((V-V12OUTPUTI)/KOUTPUTI))
FOUTP(V) = 1./(1+EXP((V-V12OUTPUTP)/KOUTPUTP))
NINF(V) = 1./(1+EXP((V-V12N)/KN))
MPINF(V) = 1./(1+EXP((V-V12MP)/KMP))
HPINF(V) = 1./(1+EXP((V-V12HP)/KHP))
TAUINF(V) = TAUHP/COSH((V-V12HP)/(2*KHP))
INAPE(V,H) = GNAPE*MPINF(V)*H*(V-ENA)
INAPI(V,H) = GNAPI*MPINF(V)*H*(V-ENA)
IKDR(V) = GKDR*NINF(V)^4*(V-EK)
IAD(V,M) = GAD*M*(V-EK)
ILE(V) = GLE*(V-ELE)
ILI(V) = GLI*(V-ELI)