Codebases and interactive data visualization supporting:
Katko et al., Gene regulatory network determinants of rapid recall in human memory CD4+ T cells
- Gene Regulatory Network Visualization Interactive visualization of gene regulatory networks using Cytoscape.
- Interactive Data Visualization The RShiny application allows interactive visualization of gene expression, transcription factor activity, data dimension reduction, and more!
- UCSC Genome Browser track hub of accessibility and maxATAC in silico TF ChIP-seq Visualize activation-dependent accessible chromatin and in silico ChIP-seq predictions for hundreds of TFs, resolved by CD4+ T cell populations and activation timepoints.
- Figure codebases enable reproduction of Katko et al. manuscript figures.