diff --git a/.github/workflows/issue_to_jira.yml b/.github/workflows/issue_to_jira.yml index a6db477..2818e29 100644 --- a/.github/workflows/issue_to_jira.yml +++ b/.github/workflows/issue_to_jira.yml @@ -1,5 +1,3 @@ -# This workflow will create a JIRA issue upon creation of a GitHub issue - name: Create JIRA issue on: @@ -7,30 +5,8 @@ on: types: [opened] jobs: - new_jira_issue: - runs-on: ubuntu-latest - - steps: - - name: JIRA Login - uses: atlassian/gajira-login@v3.0.1 - env: - JIRA_BASE_URL: ${{ secrets.JIRA_BASE_URL }} - JIRA_USER_EMAIL: ${{ secrets.JIRA_USER_EMAIL }} - JIRA_API_TOKEN: ${{ secrets.JIRA_API_TOKEN }} - - name: Jira Create issue - id: create_jira_issue - uses: atlassian/gajira-create@v3.0.1 - with: - project: GEOPY - issuetype: Story - summary: ${{ github.event.issue.title }} - description: "_from [GitHub issue #${{ github.event.issue.number }}|${{ github.event.issue.html_url }}]_" - # Additional fields in JSON format - fields: '{"components": [{"name": "param-sweeps"}]}' - - name: Post JIRA link - uses: peter-evans/create-or-update-comment@v3 - with: - # The number of the issue or pull request in which to create a comment. - issue-number: ${{ github.event.issue.number }} - # The comment body. - body: "JIRA issue [${{ steps.create_jira_issue.outputs.issue }}] was created." + call-workflow-create-jira-issue: + uses: MiraGeoscience/CI-tools/.github/workflows/reusable-jira-issue_to_jira.yml@main + secrets: inherit + with: + project_key: 'GEOPY' diff --git a/.github/workflows/pr_add_jira_summary.yml b/.github/workflows/pr_add_jira_summary.yml index f0c8a8d..794bf3f 100644 --- a/.github/workflows/pr_add_jira_summary.yml +++ b/.github/workflows/pr_add_jira_summary.yml @@ -1,6 +1,3 @@ -# This workflow will comment the PR with the JIRA issue summary -# if a JIRA issue number is detected in the branch name or title - name: Add JIRA issue summary on: @@ -8,57 +5,6 @@ on: types: [opened] jobs: - add_jira_summary: - runs-on: ubuntu-latest - - steps: - - name: Find JIRA issue key - id: find_jira_key - env: - HEAD_REF: ${{ github.head_ref}} - PR_TITLE: ${{ github.event.pull_request.title }} - run: > - echo $HEAD_REF $PR_TITLE - | echo "issue_key=$( - grep -osi "\b\(GA\|GEOPY\|DEVOPS\)[ #-]*[0-9]\+" - | head -n1 - | sed -E "s/([A-Z]+)[-# ]*([0-9]+)/\1-\2/i" - | tr [:lower:] [:upper:] - )" - >> $GITHUB_OUTPUT - - name: Get JIRA summary - id: get_jira_summary - if: ${{ steps.find_jira_key.outputs.issue_key }} - env: - JIRA_BASE_URL: ${{ secrets.JIRA_BASE_URL }} - JIRA_BASIC_AUTH: ${{ secrets.JIRA_BASIC_AUTH }} - run: > - curl -sS -X GET - -H "Authorization: Basic $JIRA_BASIC_AUTH" - -H "Content-Type: application/json" - "$JIRA_BASE_URL/rest/api/2/issue/${{ steps.find_jira_key.outputs.issue_key }}" - | echo "summary=$(jq -r '.fields.summary // empty')" >> $GITHUB_OUTPUT - - name: Extract PR title - id: get_pr_title - env: - PR_TITLE: ${{ github.event.pull_request.title }} - run: | - echo "text=$(echo $PR_TITLE | sed -E "s/^\s*[?[A-Z]+[-# ]*[0-9]+]?[-: ]*(.*)/\1/i")" >> $GITHUB_OUTPUT - - name: Add comment - if: ${{ steps.find_jira_key.outputs.issue_key }} - env: - ISSUE_SUMMARY: ${{ steps.get_jira_summary.outputs.summary }} - TITLE_TEXT: ${{ steps.get_pr_title.outputs.text }} - PR_BODY: ${{ github.event.pull_request.body }} - run: > - jq - --arg ISSUE_ID "${{ steps.find_jira_key.outputs.issue_key }}" - --arg ISSUE_SUMMARY "$(cat <<< $ISSUE_SUMMARY)" - --arg TITLE_TEXT "$(cat <<< ${TITLE_TEXT:-$ISSUE_SUMMARY})" - --arg PR_BODY "$(cat <<< $PR_BODY)" - -c '{"title": ($ISSUE_ID + ": " + $TITLE_TEXT), "body": ("**" + $ISSUE_ID + " - " + $ISSUE_SUMMARY + "**\n" + $PR_BODY)}' <<< {} - | curl -sS -X POST -d @- - -H "Authorization: token ${{ secrets.GITHUB_TOKEN }}" - -H "Content-Type: application/json" - "$GITHUB_API_URL/repos/$GITHUB_REPOSITORY/pulls/${{ github.event.pull_request.number }}" - > /dev/null + call-workflow-add-jira-issue-summary: + uses: MiraGeoscience/CI-tools/.github/workflows/reusable-jira-pr_add_jira_summary.yml@main + secrets: inherit diff --git a/.github/workflows/pytest-unix-os.yml b/.github/workflows/pytest-unix-os.yml deleted file mode 100644 index 35444bc..0000000 --- a/.github/workflows/pytest-unix-os.yml +++ /dev/null @@ -1,64 +0,0 @@ -name: pytest on Unix OS - -on: - pull_request: - types: [opened, synchronize, reopened, ready_for_review] - branches: - - develop - - main - - release/** - - feature/** - - hotfix/** - push: - branches: - - develop - - main - - release/** - - feature/** - - hotfix/** - -jobs: - pytest: - name: pytest - if: github.event_name != 'pull_request' || github.event.pull_request.draft == false - strategy: - fail-fast: false - matrix: - os: [ubuntu-latest] - python_ver: ['3.9', '3.10'] - defaults: - run: - shell: bash - runs-on: ${{ matrix.os }} - env: - POETRY_VIRTUALENVS_CREATE: true - POETRY_VIRTUALENVS_IN_PROJECT: true - steps: - - uses: actions/checkout@v4 - - name: Set up Python version - uses: actions/setup-python@v4 - with: - python-version: ${{ matrix.python_ver }} - - name: Get full Python version - id: full-python-version - run: echo ::set-output name=version::$(python -c "import sys; print('-'.join(str(v) for v in sys.version_info))") - - name: Install Poetry - run: | - curl -sSL https://install.python-poetry.org | POETRY_HOME=$HOME/.poetry python - - echo "$HOME/.poetry/bin" >> $GITHUB_PATH - - name: Set up cache - uses: actions/cache@v3 - id: cache - env: - # Increase this value to reset cache if poetry.lock has not changed - CACHE_NUMBER: 1 - with: - path: .venv - key: venv-${{ runner.os }}-${{ steps.full-python-version.outputs.version }}-${{ hashFiles('**/poetry.lock') }}-{{ env.CACHE_NUMBER }} - - name: Ensure cache is healthy - if: steps.cache.outputs.cache-hit == 'true' - run: timeout 10s poetry run pip --version || rm -rf .venv - - name: Install dependencies - run: poetry install -vvv - - name: pytest - run: poetry run pytest --cov --cov-report=xml diff --git a/.github/workflows/pytest-windows.yml b/.github/workflows/pytest-windows.yml deleted file mode 100644 index a9f0bce..0000000 --- a/.github/workflows/pytest-windows.yml +++ /dev/null @@ -1,70 +0,0 @@ -name: pytest on Windows - -on: - pull_request: - types: [opened, synchronize, reopened, ready_for_review] - branches: - - develop - - main - - release/** - - feature/** - - hotfix/** - push: - branches: - - develop - - main - - release/** - - feature/** - - hotfix/** - -jobs: - pytest: - name: pytest (Windows) - if: github.event_name != 'pull_request' || github.event.pull_request.draft == false - strategy: - fail-fast: false - matrix: - python_ver: ['3.9', '3.10'] - defaults: - run: - shell: bash - runs-on: windows-latest - env: - POETRY_VIRTUALENVS_CREATE: true - POETRY_VIRTUALENVS_IN_PROJECT: true - steps: - - uses: actions/checkout@v4 - - name: Set up Python version - uses: actions/setup-python@v4 - with: - python-version: ${{ matrix.python_ver }} - - name: Get full Python version - id: full-python-version - run: echo ::set-output name=version::$(python -c "import sys; print('-'.join(str(v) for v in sys.version_info))") - - name: Install Poetry - run: | - curl -sSL https://install.python-poetry.org | POETRY_HOME=$HOME/.poetry python - - echo "$HOME/.poetry/bin" >> $GITHUB_PATH - - name: Set up cache - uses: actions/cache@v3 - id: cache - env: - # Increase this value to reset cache if poetry.lock has not changed - CACHE_NUMBER: 1 - with: - path: .venv - key: venv-${{ runner.os }}-${{ steps.full-python-version.outputs.version }}-${{ hashFiles('**/poetry.lock') }}-{{ env.CACHE_NUMBER }} - - name: Ensure cache is healthy - if: steps.cache.outputs.cache-hit == 'true' - run: timeout 10s poetry run pip --version || rm -rf .venv - - name: Install dependencies - run: poetry install -vvv - - name: pytest - run: poetry run pytest --cov --cov-report=xml - - name: Codecov - if: ${{ success() && matrix.python_ver == '3.10' }} - uses: codecov/codecov-action@v4 - with: - name: GitHub - fail_ci_if_error: true - token: ${{ secrets.CODECOV_TOKEN }} diff --git a/.github/workflows/python_analysis.yml b/.github/workflows/python_analysis.yml new file mode 100644 index 0000000..a5fe6b6 --- /dev/null +++ b/.github/workflows/python_analysis.yml @@ -0,0 +1,43 @@ +name: Python analysis + +on: + pull_request: + types: [opened, synchronize, reopened, ready_for_review] + branches: + - develop + - main + - release/** + - feature/** + - hotfix/** + push: + branches: + - develop + - main + - release/** + - feature/** + - hotfix/** + +concurrency: + group: ${{ github.workflow }}-${{ github.head_ref || github.run_id }} + cancel-in-progress: true + +jobs: + call-workflow-static-analysis: + name: Static analysis + uses: MiraGeoscience/CI-tools/.github/workflows/reusable-python-static_analysis.yml@main + with: + package-manager: 'poetry' + app-name: 'param_sweeps' + python-version: '3.10' + call-workflow-pytest: + name: Pytest + uses: MiraGeoscience/CI-tools/.github/workflows/reusable-python-pytest.yml@main + with: + package-manager: 'poetry' + python-versions: '["3.10", "3.11", "3.12"]' + os: '["ubuntu-latest", "windows-latest"]' + cache-number: 1 + codecov-reference-python-version: '3.10' + codecov-reference-os: '["windows-latest"]' + secrets: + CODECOV_TOKEN: ${{ secrets.CODECOV_TOKEN }} diff --git a/.github/workflows/python_deploy_dev.yml b/.github/workflows/python_deploy_dev.yml new file mode 100644 index 0000000..fa98a59 --- /dev/null +++ b/.github/workflows/python_deploy_dev.yml @@ -0,0 +1,35 @@ +name: Deploy python package in development + +on: + push: + tags: + - 'v*' # Push events to every version tag (eg. v1.0.0) + +concurrency: + group: ${{ github.workflow }}-${{ github.ref || github.run_id }} + cancel-in-progress: true + +jobs: + call-workflow-conda-publish: + name: Publish development conda package on JFrog Artifactory + uses: MiraGeoscience/CI-tools/.github/workflows/reusable-python-publish_conda_package.yml@main + with: + package-name: 'param-sweeps' + python-version: '3.10' + virtual-repo-names: '["public-conda-dev"]' + secrets: + JFROG_ARTIFACTORY_URL: ${{ secrets.JFROG_ARTIFACTORY_URL }} + JFROG_ARTIFACTORY_TOKEN: ${{ secrets.JFROG_ARTIFACTORY_TOKEN }} + call-workflow-pypi-publish: + name: Publish development pypi package (JFrog Artifactory, TestPyPI) + uses: MiraGeoscience/CI-tools/.github/workflows/reusable-python-publish_pypi_package.yml@main + with: + package-manager: 'poetry' + package-name: 'param-sweeps' + version-tag: ${{ github.ref_name }} + python-version: '3.10' + virtual-repo-names: '["public-pypi-dev", "test-pypi"]' + secrets: + JFROG_ARTIFACTORY_URL: ${{ secrets.JFROG_ARTIFACTORY_URL }} + JFROG_ARTIFACTORY_TOKEN: ${{ secrets.JFROG_ARTIFACTORY_TOKEN }} + PYPI_TOKEN: ${{ secrets.TEST_PYPI_TOKEN }} diff --git a/.github/workflows/python_deploy_prod.yml b/.github/workflows/python_deploy_prod.yml new file mode 100644 index 0000000..5424e53 --- /dev/null +++ b/.github/workflows/python_deploy_prod.yml @@ -0,0 +1,46 @@ +name: Deploy python package in production + +on: + release: + types: [published] + workflow_dispatch: + inputs: + release-tag: + description: 'Tag for the existing (draft) release to publish assets from' + required: true + publish-conda: + description: 'Publish Conda package' + required: false + default: true + publish-pypi: + description: 'Publish PyPI package' + required: false + default: true + +concurrency: + group: ${{ github.workflow }}-${{ github.event.release.tag_name || github.event.inputs.release-tag || github.run_id }} + cancel-in-progress: true + +jobs: + call-workflow-conda-release: + name: Publish production Conda package on JFrog Artifactory + uses: MiraGeoscience/CI-tools/.github/workflows/reusable-python-release_conda_assets.yml@main + if: ${{ github.event_name == 'release' || github.event.inputs.publish-conda == 'true' }} + with: + virtual-repo-names: '["public-conda-prod"]' + release-tag: ${{ github.event.release.tag_name || github.event.inputs.release-tag }} + secrets: + JFROG_ARTIFACTORY_URL: ${{ secrets.JFROG_ARTIFACTORY_URL }} + JFROG_ARTIFACTORY_TOKEN: ${{ secrets.JFROG_ARTIFACTORY_TOKEN }} + call-workflow-pypi-release: + name: Publish production PyPI package (JFrog Artifactory, PyPI) + if: ${{ github.event_name == 'release' || github.event.inputs.publish-pypi == 'true' }} + uses: MiraGeoscience/CI-tools/.github/workflows/reusable-python-release_pypi_assets.yml@main + with: + package-name: 'param-sweeps' + virtual-repo-names: '["public-pypi-prod", "pypi"]' + release-tag: ${{ github.event.release.tag_name || github.event.inputs.release-tag }} + secrets: + JFROG_ARTIFACTORY_URL: ${{ secrets.JFROG_ARTIFACTORY_URL }} + JFROG_ARTIFACTORY_TOKEN: ${{ secrets.JFROG_ARTIFACTORY_TOKEN }} + PYPI_TOKEN: ${{ secrets.PYPI_TOKEN }} diff --git a/.github/workflows/static-analysis.yml b/.github/workflows/static-analysis.yml deleted file mode 100644 index ba30f7d..0000000 --- a/.github/workflows/static-analysis.yml +++ /dev/null @@ -1,66 +0,0 @@ -name: static analysis - -on: - pull_request: - types: [opened, synchronize, reopened, ready_for_review] - branches: - - develop - - main - - release/** - - feature/** - - hotfix/** - push: - branches: - - develop - - main - - release/** - - feature/** - - hotfix/** - -jobs: - pylint: - name: pylint - if: github.event_name != 'pull_request' || github.event.pull_request.draft == false - runs-on: ubuntu-latest - env: - POETRY_VIRTUALENVS_CREATE: true - POETRY_VIRTUALENVS_IN_PROJECT: true - steps: - - uses: actions/checkout@v4 - - name: Set up Python version - uses: actions/setup-python@v4 - with: - python-version: 3.9 - - name: Get full Python version - id: full-python-version - shell: bash - run: echo ::set-output name=version::$(python -c "import sys; print('-'.join(str(v) for v in sys.version_info))") - - name: Install Poetry - run: | - curl -sSL https://install.python-poetry.org | POETRY_HOME=$HOME/.poetry python - - echo "$HOME/.poetry/bin" >> $GITHUB_PATH - - name: Set up cache - uses: actions/cache@v3 - id: cache - env: - # Increase this value to reset cache if poetry.lock has not changed - CACHE_NUMBER: 1 - with: - path: .venv - key: venv-${{ runner.os }}-${{ steps.full-python-version.outputs.version }}-${{ hashFiles('**/poetry.lock') }}-{{ env.CACHE_NUMBER }} - - name: Ensure cache is healthy - if: steps.cache.outputs.cache-hit == 'true' - shell: bash - run: timeout 10s poetry run pip --version || rm -rf .venv - - name: Install dependencies - run: poetry install -vvv - - name: Run pylint on modified files - if: github.event_name == 'pull_request' - run: >- - poetry run pylint $( - git diff --diff-filter=AM --name-only refs/remotes/origin/${{github.base_ref}}... | grep -E '^(param_sweeps|tests)/.*\.py$' - || echo 'param_sweeps/__init__.py' - ) - - name: Run pylint on all files - if: github.event_name == 'push' - run: poetry run pylint param_sweeps tests diff --git a/.gitignore b/.gitignore index 18509f5..49f361d 100644 --- a/.gitignore +++ b/.gitignore @@ -2,3 +2,8 @@ .idea /tests/**/*.geoh5 /dist/** + +#pycharm +/.idea/* +!/.idea/scopes/ +!/.idea/copyright/ diff --git a/.idea/copyright/MiraGeoscience.xml b/.idea/copyright/MiraGeoscience.xml new file mode 100644 index 0000000..f21f1cc --- /dev/null +++ b/.idea/copyright/MiraGeoscience.xml @@ -0,0 +1,8 @@ + + + + \ No newline at end of file diff --git a/.idea/copyright/profiles_settings.xml b/.idea/copyright/profiles_settings.xml new file mode 100644 index 0000000..6dd2113 --- /dev/null +++ b/.idea/copyright/profiles_settings.xml @@ -0,0 +1,25 @@ + + + + + + + + + + + \ No newline at end of file diff --git a/.idea/scopes/sources.xml b/.idea/scopes/sources.xml new file mode 100644 index 0000000..2bb3159 --- /dev/null +++ b/.idea/scopes/sources.xml @@ -0,0 +1,3 @@ + + + \ No newline at end of file diff --git a/.pre-commit-config.yaml b/.pre-commit-config.yaml index 5292167..cf8a808 100644 --- a/.pre-commit-config.yaml +++ b/.pre-commit-config.yaml @@ -2,7 +2,7 @@ default_language_version: python: python3 exclude: ^docs/(source/conf.py|_ext/) -default_stages: [commit,push] +default_stages: [pre-commit,pre-push] fail_fast: false ci: @@ -17,44 +17,43 @@ repos: - id: poetry-check args: [--lock] - repo: https://github.com/hadialqattan/pycln - rev: v2.4.0 + rev: v2.5.0 hooks: - id: pycln args: [--config=pyproject.toml] -- repo: https://github.com/PyCQA/isort - rev: 5.13.2 +- repo: https://github.com/astral-sh/ruff-pre-commit + rev: v0.9.0 hooks: - - id: isort - additional_dependencies: [tomli] # to read config from pyproject.toml -- repo: https://github.com/psf/black - rev: 24.4.2 - hooks: - - id: black -- repo: https://github.com/PyCQA/flake8 - rev: 7.0.0 - hooks: - - id: flake8 -- repo: https://github.com/asottile/pyupgrade - rev: v3.15.2 - hooks: - - id: pyupgrade - args: [--py310-plus] + - id: ruff + args: + - --fix + - --exit-non-zero-on-fix +# - --unsafe-fixes + - id: ruff-format - repo: https://github.com/pre-commit/mirrors-mypy - rev: v1.10.0 + rev: v1.14.1 hooks: - id: mypy additional_dependencies: [ - numpy==1.26.*, # pre-commit CI does not provide numpy 1.23.* - pydantic==2.5.*, + numpy==1.26.*, tomli, # to read config from pyproject.toml types-toml, + types-PyYAML, ] exclude: ^docs/ - repo: https://github.com/codingjoe/relint - rev: 3.1.1 + rev: 3.3.1 hooks: - id: relint args: [-W] # to fail on warnings +- repo: https://github.com/MiraGeoscience/pre-commit-hooks + rev: v1.0.2 + hooks: + - id: check-copyright + files: (^package\.rst|^LICENSE|^README(|-dev)\.rst|\.py|\.pyi)$ + exclude: (^\.|^docs/) + - id: prepare-commit-msg + - id: check-commit-msg - repo: local hooks: - id: pylint @@ -64,31 +63,14 @@ repos: require_serial: true # pylint does its own parallelism types: [python] exclude: ^(devtools|docs)/ - - id: check-copyright - name: Check copyright - entry: python devtools/check-copyright.py - language: python - types: [text] - files: (^LICENSE|^README(|-dev).rst|\.py|\.pyi)$ - exclude: (^\.|^docs/) - - id: prepare-commit-msg - stages: [prepare-commit-msg] - name: Prepare commit message - entry: python devtools/git_message_hook.py --prepare - language: python - - id: check-commit-msg - stages: [commit-msg] - name: Check commit message - entry: python devtools/git_message_hook.py --check - language: python - repo: https://github.com/codespell-project/codespell - rev: v2.2.6 + rev: v2.3.0 hooks: - id: codespell exclude: (\.lock|\.ipynb|^THIRD_PARTY_SOFTWARE\.rst)$ entry: codespell -I .codespellignore - repo: https://github.com/pre-commit/pre-commit-hooks - rev: v4.6.0 + rev: v5.0.0 hooks: - id: trailing-whitespace exclude: \.mdj$ @@ -96,7 +78,8 @@ repos: exclude_types: [jupyter] - id: check-toml - id: check-yaml -# - id: check-added-large-files # crashing on some configuration. To be investigated + exclude: ^meta.yaml$ + - id: check-added-large-files - id: check-case-conflict - id: check-merge-conflict - id: debug-statements @@ -116,7 +99,7 @@ repos: exclude_types: [jupyter] exclude: ^docs/(.*/)?images/ - repo: https://github.com/rstcheck/rstcheck - rev: v6.2.0 + rev: v6.2.4 hooks: - id: rstcheck exclude: ^THIRD_PARTY_SOFTWARE.rst$ diff --git a/LICENSE b/LICENSE index 8148138..ee3e01f 100644 --- a/LICENSE +++ b/LICENSE @@ -1,6 +1,6 @@ MIT License -Copyright (c) 2024 Mira Geoscience +Copyright (c) 2022-2025 Mira Geoscience Permission is hereby granted, free of charge, to any person obtaining a copy of this software and associated documentation files (the "Software"), to deal diff --git a/README.rst b/README.rst index d32d82d..d91c291 100644 --- a/README.rst +++ b/README.rst @@ -16,20 +16,20 @@ application, use the following command:: $ python -m param_sweeps.generate some_file.ui.json -This will create a new `some_file_sweep.ui.json` file that may be run +This will create a new ``some_file_sweep.ui.json`` file that may be run with:: $ python -m param_sweeps.driver some_file_sweep.ui.json By default, this would execute a single run of the original parameters. -To design a sweep, simply drag the `some_file_sweep.ui.json` file into +To design a sweep, simply drag the ``some_file_sweep.ui.json`` file into `Geoscience ANALYST Pro `_. session that produced the original file and select start, end, and number of samples values for parameters that you would like to sweep. -To organize the output, param-sweeps uses a `UUID` file naming scheme, with -a `lookup.json` file to map individual parameter sets back to their respective +To organize the output, param-sweeps uses a ``UUID`` file naming scheme, with +a ``lookup.json`` file to map individual parameter sets back to their respective files. @@ -71,4 +71,4 @@ Third Party Software notices and/or additional terms and conditions are located Copyright ^^^^^^^^^ -Copyright (c) 2024 Mira Geoscience Ltd. +Copyright (c) 2022-2025 Mira Geoscience Ltd. diff --git a/THIRD_PARTY_SOFTWARE.rst b/THIRD_PARTY_SOFTWARE.rst index 4b0240b..a304ef9 100644 --- a/THIRD_PARTY_SOFTWARE.rst +++ b/THIRD_PARTY_SOFTWARE.rst @@ -15,7 +15,7 @@ compatibly licensed. We list these here. - LGPL-3.0-or-later - Python API for geoh5, an open file format for geoscientific data * - `h5py `_ - - BSD License + - BSD-3-Clause - The h5py package provides both a high- and low-level interface to the HDF5 library from Python. * - `numpy `_ - BSD-3-Clause diff --git a/devtools/check-copyright.py b/devtools/check-copyright.py deleted file mode 100644 index 923e6a3..0000000 --- a/devtools/check-copyright.py +++ /dev/null @@ -1,51 +0,0 @@ -#!/usr/bin/env python3 - -# Copyright (c) 2024 Mira Geoscience Ltd. -# -# This file is part of param-sweeps. -# -# param-sweeps is distributed under the terms and conditions of the MIT License -# (see LICENSE file at the root of this source code package). - -from __future__ import annotations - -import re -import sys -from datetime import date - -if __name__ == "__main__": - current_year = date.today().year - copyright_re = re.compile( - rf"\bcopyright \(c\) (:?\d{{4}}-|)\b{current_year}\b", re.IGNORECASE - ) - files = sys.argv[1:] - max_lines = 10 - report_files = [] - for f in files: - with open(f, encoding="utf-8") as file: - count = 0 - has_dated_copyright = False - for line in file: - count += 1 - if count >= max_lines and not ( - f.endswith("README.rst") or f.endswith("README-dev.rst") - ): - break - if re.search(copyright_re, line): - has_dated_copyright = True - break - - if not has_dated_copyright: - report_files.append(f) - - if len(report_files) > 0: - for f in report_files: - sys.stderr.write(f"{f}: No copyright or invalid year\n") - sys.exit(1) - -# readonly CURRENT_YEAR=$(date +"%Y") - -# if ! grep -e "Copyright (c) .*$CURRENT_YEAR" $(head -10 $f) 2>&1 1>/dev/null; then -# echo "File '$f' has no copyright or an invalid year" -# exit 1 -# fi diff --git a/devtools/git_message_hook.py b/devtools/git_message_hook.py deleted file mode 100644 index 30c43d3..0000000 --- a/devtools/git_message_hook.py +++ /dev/null @@ -1,222 +0,0 @@ -#!/usr/bin/env python3 - -# Copyright (c) 2024 Mira Geoscience Ltd. -# -# This file is part of param-sweeps. -# -# param-sweeps is distributed under the terms and conditions of the MIT License -# (see LICENSE file at the root of this source code package). - -"""Some Git pre-commit hooks implementations.""" - -from __future__ import annotations - -import argparse -import re -import shlex -import subprocess -import sys - - -def get_jira_id(text) -> str: - """Detect a JIRA issue ID at the begging of the given text. - - :return: the JIRA issue ID if found, else empty string - """ - - class JiraPattern: - """Internal class that encapsulates the regular expression for the JIRA pattern, - making sure it gets compiled only once.""" - - __pattern = re.compile( - r"(?:GEOPY|DEVOPS|QA|GI|GA|GMS|VPem1D|VPem3D|VPmg|UBCGIF|LICMGR)-\d+" - ) - - @staticmethod - def get(): - """:return: the compiled regular expression for the JIRA pattern""" - return JiraPattern.__pattern - - # use re.match() rather than re.search() to enforce the JIRA reference to be at the beginning - match = re.match(JiraPattern.get(), text.strip()) - return match.group(0) if match else "" - - -def get_branch_name() -> str | None: - """:return: the name of the current branch""" - - git_proc = subprocess.run( - shlex.split("git branch --list"), stdout=subprocess.PIPE, text=True, check=False - ) - - # cannot use HEAD during rebase - # git_proc = subprocess.run( - # shlex.split('git symbolic-ref --short HEAD'), stdout=subprocess.PIPE, universal_newlines=True - # ) - # Note: version above suggested by Atlassian. Could also use: git rev-parse --abbrev-ref HEAD - - if git_proc.returncode != 0: - return None - - current_branch = None - # current branch is prefixed by '*' - for line in git_proc.stdout.splitlines(): - stripped = line.strip() - if stripped and stripped[0] == "*": - current_branch = stripped[1:] - break - assert current_branch is not None - - class RebasingPattern: - """Internal class that encapsulates the regular expression for the rebasing - message pattern, making sure it gets compiled only once.""" - - __pattern = re.compile(r"\(.*\s(\S+)\s*\)") - - @staticmethod - def get(): - """:return: the compiled regular expression for the Rebasing pattern""" - return RebasingPattern.__pattern - - match = re.match(RebasingPattern.get(), current_branch.strip()) - if match: - return match.group(1) - - return current_branch - - -def check_commit_message(filepath: str) -> tuple[bool, str]: - """Check if the branch name or the commit message starts with a reference to JIRA, - and if the message meets the minimum required length for the summary line. - - The JIRA reference has to be at the beginning of the branch name, or of the commit - message. - :return: a tuple telling whether the commit message is valid or not, and an error - message (empty in case the message is valid). - """ - - branch_jira_id = "" - branch_name = get_branch_name() - if branch_name: - branch_jira_id = get_jira_id(branch_name) - - message_jira_id = "" - first_line = None - with open(filepath) as message_file: - for line in message_file: - if not line.startswith("#") and len(line.strip()) > 0: - # test only the first non-comment line that is not empty - # (should we reject messages with empty first line?) - first_line = line - message_jira_id = get_jira_id(first_line) - break - assert first_line is not None - - if not branch_jira_id and not ( - message_jira_id or first_line.strip().lower().startswith("merge") - ): - return ( - False, - "Either the branch name or the commit message must start with a JIRA ID.", - ) - - if branch_jira_id and message_jira_id and branch_jira_id != message_jira_id: - return ( - False, - "Different JIRA ID in commit message %s and in branch name %s." - % (message_jira_id, branch_jira_id), - ) - - stripped_message_line = "" - if first_line: - stripped_message_line = first_line.strip() - if message_jira_id: - stripped_message_line = stripped_message_line[ - len(message_jira_id) + 1 : - ].strip() - - min_required_length = 10 - if len(stripped_message_line) < min_required_length: - return ( - False, - "First line of commit message must be at least %s characters long, " - "beyond the JIRA ID." % min_required_length, - ) - - return True, "" - - -def check_commit_msg(filepath: str) -> None: - """To be used a the Git commit-msg hook. - - Exit with non-0 status if the commit message is deemed invalid. - """ - - (is_valid, error_message) = check_commit_message(filepath) - if not is_valid: - print( - """commit-msg hook: **ERROR** %s - Message has been saved to %s.""" - % (error_message, filepath) - ) - sys.exit(1) - - -def prepare_commit_msg(filepath: str, source: str | None = None) -> None: - """To be used a the Git prepare-commit-msg hook. - - Will add the JIRA ID found in the branch name in case it is missing from the commit - message. - """ - - branch_jira_id = "" - branch_name = get_branch_name() - if branch_name: - branch_jira_id = get_jira_id(branch_name) - - if not branch_jira_id: - return - - if source not in [None, "message", "template"]: - return - - with open(filepath, "r+", encoding="utf-8") as message_file: - message_has_jira_id = False - message_lines = message_file.readlines() - for line_index, line_content in enumerate(message_lines): - if not line_content.startswith("#"): - # test only the first non-comment line - message_jira_id = get_jira_id(line_content) - if not message_jira_id: - message_lines[line_index] = branch_jira_id + ": " + line_content - message_has_jira_id = True - break - - if not message_has_jira_id: - # message is empty or all lines are comments: insert JIRA ID at the very beginning - message_lines.insert(0, branch_jira_id + ": ") - - message_file.seek(0, 0) - message_file.write("".join(message_lines)) - - -if __name__ == "__main__": - parser = argparse.ArgumentParser() - parser.add_argument("msg_file", help="the message file") - group = parser.add_mutually_exclusive_group(required=True) - group.add_argument( - "-p", "--prepare", action="store_true", help="prepare the commit message" - ) - group.add_argument( - "-c", - "--check", - action="store_true", - help="check if the commit message is valid", - ) - parser.add_argument("args", nargs=argparse.REMAINDER) - - args = parser.parse_args() - if args.prepare: - prepare_commit_msg(args.msg_file, *args.args) - elif args.check: - check_commit_msg(args.msg_file) diff --git a/meta.yaml b/meta.yaml new file mode 100644 index 0000000..16603ef --- /dev/null +++ b/meta.yaml @@ -0,0 +1,51 @@ +{% set name = "param-sweeps" %} +{% set version = "0.2.0" %} + +package: + name: {{ name|lower }} + version: {{ version }} + +source: + # url: https://github.com/MiraGeoscience/{{ name }}/archive/v{{ version }}.tar.gz + # sha256: 51e51c36d20fab27e3bb4a91c0a53bcbb0568f3fbf79fb9cf967db5bf665371d + path: ../{{ name }} + +build: + noarch: python + script: {{ PYTHON }} -m pip install . -vv --no-deps --no-build-isolation + number: 0 + +requirements: + host: + - python >=3.10.0,<4 + - poetry-core >=1.0.0 + - setuptools + - pip + run: + - python >=3.10.0,<4 + - numpy >=1.26.0,<1.27.0 + - geoh5py >=0.10.0b1,<0.11.0a.dev + +test: + imports: + - param_sweeps + commands: + - pip check + requires: + - pip + +about: + home: https://www.mirageoscience.com/mining-industry-software/python-integration/ + summary: 'A Parameter sweeper for applications driven by ui.json files.' + description: | + The param-sweeps library contains two main modules. One is for generating sweep files, + and the other is to run a sweep over some number of parameters in a driver application. + license: MIT + license_file: + - LICENSE + dev_url: https://github.com/MiraGeoscience/param-sweeps + +extra: + recipe-maintainers: + - SophieCurinier + - sebhmg diff --git a/param_sweeps/__init__.py b/param_sweeps/__init__.py index 99fa676..3d0f7dd 100644 --- a/param_sweeps/__init__.py +++ b/param_sweeps/__init__.py @@ -1,9 +1,11 @@ -# Copyright (c) 2024 Mira Geoscience Ltd. -# -# This file is part of param-sweeps. -# -# param-sweeps is distributed under the terms and conditions of the MIT License -# (see LICENSE file at the root of this source code package). +# ''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''' +# Copyright (c) 2022-2025 Mira Geoscience Ltd. ' +# ' +# This file is part of param-sweeps package. ' +# ' +# param-sweeps is distributed under the terms and conditions of the MIT License ' +# (see LICENSE file at the root of this source code package). ' +# ' +# ''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''' - -__version__ = "0.1.8" +__version__ = "0.2.0" diff --git a/param_sweeps/constants.py b/param_sweeps/constants.py index 7420604..d35880a 100644 --- a/param_sweeps/constants.py +++ b/param_sweeps/constants.py @@ -1,14 +1,18 @@ -# Copyright (c) 2024 Mira Geoscience Ltd. -# -# This file is part of param-sweeps. -# -# param-sweeps is distributed under the terms and conditions of the MIT License -# (see LICENSE file at the root of this source code package). +# ''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''' +# Copyright (c) 2022-2025 Mira Geoscience Ltd. ' +# ' +# This file is part of param-sweeps package. ' +# ' +# param-sweeps is distributed under the terms and conditions of the MIT License ' +# (see LICENSE file at the root of this source code package). ' +# ' +# ''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''' from __future__ import annotations from typing import Any + default_ui_json: dict[str, Any] = { "title": "Parameter sweep", "worker_uijson": None, diff --git a/param_sweeps/driver.py b/param_sweeps/driver.py index ea9a91d..277e5f3 100644 --- a/param_sweeps/driver.py +++ b/param_sweeps/driver.py @@ -1,9 +1,12 @@ -# Copyright (c) 2024 Mira Geoscience Ltd. -# -# This file is part of param-sweeps. -# -# param-sweeps is distributed under the terms and conditions of the MIT License -# (see LICENSE file at the root of this source code package). +# ''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''' +# Copyright (c) 2022-2025 Mira Geoscience Ltd. ' +# ' +# This file is part of param-sweeps package. ' +# ' +# param-sweeps is distributed under the terms and conditions of the MIT License ' +# (see LICENSE file at the root of this source code package). ' +# ' +# ''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''' from __future__ import annotations @@ -129,7 +132,7 @@ def get_lookup(self): iterations = list(itertools.product(*sets.values())) for iteration in iterations: param_uuid = SweepDriver.uuid_from_params(iteration) - lookup[param_uuid] = dict(zip(sets.keys(), iteration)) + lookup[param_uuid] = dict(zip(sets.keys(), iteration, strict=False)) lookup[param_uuid]["status"] = "pending" lookup = self.update_lookup(lookup, gather_first=True) diff --git a/param_sweeps/generate.py b/param_sweeps/generate.py index 7c25388..828a0b8 100644 --- a/param_sweeps/generate.py +++ b/param_sweeps/generate.py @@ -1,9 +1,12 @@ -# Copyright (c) 2024 Mira Geoscience Ltd. -# -# This file is part of param-sweeps. -# -# param-sweeps is distributed under the terms and conditions of the MIT License -# (see LICENSE file at the root of this source code package). +# ''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''' +# Copyright (c) 2022-2025 Mira Geoscience Ltd. ' +# ' +# This file is part of param-sweeps package. ' +# ' +# param-sweeps is distributed under the terms and conditions of the MIT License ' +# (see LICENSE file at the root of this source code package). ' +# ' +# ''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''' from __future__ import annotations diff --git a/param_sweeps/sample_driver.py b/param_sweeps/sample_driver.py index aa6fb4f..4f81f70 100644 --- a/param_sweeps/sample_driver.py +++ b/param_sweeps/sample_driver.py @@ -1,9 +1,12 @@ -# Copyright (c) 2024 Mira Geoscience Ltd. -# -# This file is part of param-sweeps. -# -# param-sweeps is distributed under the terms and conditions of the MIT License -# (see LICENSE file at the root of this source code package). +# ''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''' +# Copyright (c) 2022-2025 Mira Geoscience Ltd. ' +# ' +# This file is part of param-sweeps package. ' +# ' +# param-sweeps is distributed under the terms and conditions of the MIT License ' +# (see LICENSE file at the root of this source code package). ' +# ' +# ''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''' from __future__ import annotations diff --git a/poetry.lock b/poetry.lock index 8c4f36d..68e872f 100644 --- a/poetry.lock +++ b/poetry.lock @@ -1,14 +1,25 @@ -# This file is automatically @generated by Poetry 1.8.3 and should not be changed by hand. +# This file is automatically @generated by Poetry 1.8.5 and should not be changed by hand. + +[[package]] +name = "annotated-types" +version = "0.7.0" +description = "Reusable constraint types to use with typing.Annotated" +optional = false +python-versions = ">=3.8" +files = [ + {file = "annotated_types-0.7.0-py3-none-any.whl", hash = "sha256:1f02e8b43a8fbbc3f3e0d4f0f4bfc8131bcb4eebe8849b8e5c773f3a1c582a53"}, + {file = "annotated_types-0.7.0.tar.gz", hash = "sha256:aff07c09a53a08bc8cfccb9c85b05f1aa9a2a6f23728d790723543408344ce89"}, +] [[package]] name = "astroid" -version = "3.1.0" +version = "3.3.5" description = "An abstract syntax tree for Python with inference support." optional = false -python-versions = ">=3.8.0" +python-versions = ">=3.9.0" files = [ - {file = "astroid-3.1.0-py3-none-any.whl", hash = "sha256:951798f922990137ac090c53af473db7ab4e70c770e6d7fae0cec59f74411819"}, - {file = "astroid-3.1.0.tar.gz", hash = "sha256:ac248253bfa4bd924a0de213707e7ebeeb3138abeb48d798784ead1e56d419d4"}, + {file = "astroid-3.3.5-py3-none-any.whl", hash = "sha256:a9d1c946ada25098d790e079ba2a1b112157278f3fb7e718ae6a9252f5835dc8"}, + {file = "astroid-3.3.5.tar.gz", hash = "sha256:5cfc40ae9f68311075d27ef68a4841bdc5cc7f6cf86671b49f00607d30188e2d"}, ] [package.dependencies] @@ -27,63 +38,73 @@ files = [ [[package]] name = "coverage" -version = "7.4.4" +version = "7.6.7" description = "Code coverage measurement for Python" optional = false -python-versions = ">=3.8" +python-versions = ">=3.9" files = [ - {file = "coverage-7.4.4-cp310-cp310-macosx_10_9_x86_64.whl", hash = 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"sha256:83f085bd5ca59c80295fc2a82ab5dac679cbe02b9f33f7d83af68e241bea51b0"}, + {file = "typing_extensions-4.12.2-py3-none-any.whl", hash = "sha256:04e5ca0351e0f3f85c6853954072df659d0d13fac324d0072316b67d7794700d"}, + {file = "typing_extensions-4.12.2.tar.gz", hash = "sha256:1a7ead55c7e559dd4dee8856e3a88b41225abfe1ce8df57b7c13915fe121ffb8"}, ] [metadata] lock-version = "2.0" -python-versions = "^3.9,<3.11" -content-hash = "99f5d6ad97d5f485aa96db2abee5084d6b8ac599ef4323a2cb4571943e8bade3" +python-versions = "^3.10" +content-hash = "af687f7a56cb0b01cc2300eeae1b8777982410ef182498eb8b1a0f01684e8d4e" diff --git a/pyproject.toml b/pyproject.toml index 3a3f8f3..6f285f9 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -1,13 +1,13 @@ [tool.poetry] name = "param-sweeps" -version = "0.1.8" +version = "0.2.0" description = "Parameter sweeper for ui.json powered applications" license = "MIT" authors = ["Mira Geoscience "] maintainers = ["Benjamin Kary "] repository = "https://github.com/MiraGeoscience/param-sweeps" -#documentatio = "https://mirageoscience-param-sweeps.readthedocs-hosted.com/" +#documentation = "https://mirageoscience-param-sweeps.readthedocs-hosted.com/" homepage = "https://www.mirageoscience.com/mining-industry-software/python-integration/" readme = "README.rst" @@ -27,38 +27,70 @@ classifiers = [ ] include = [ - { path = "COPYING", format = ["sdist", "wheel"] }, - { path = "COPYING.LESSER", format = ["sdist", "wheel"] }, - { path = "LICENSE", format = ["sdist", "wheel"] }, - { path = "README.rst", format = ["sdist", "wheel"] }, - { path = "THIRD_PARTY_SOFTWARE.rst", format = ["sdist", "wheel"] }, - { path = "docs/**/THIRD_PARTY_SOFTWARE.rst", format = ["sdist", "wheel"] }, + { path = "COPYING" }, + { path = "COPYING.LESSER" }, + { path = "LICENSE" }, + { path = "README.rst" }, + { path = "THIRD_PARTY_SOFTWARE.rst" }, + { path = "docs/**/THIRD_PARTY_SOFTWARE.rst" }, ] [tool.poetry.dependencies] -python = "^3.9,<3.11" +python = "^3.10" -numpy = "~1.23.5" # also in geoh5py +numpy = "~1.26.0" # also in geoh5py ## dependencies from Git repositories #------------------------------------ -geoh5py = {version = "~0.9.0", allow-prereleases = true} -#geoh5py = {git = "https://github.com/MiraGeoscience/geoh5py.git", branch = "release/0.9.0"} -#geoh5py = {url = "https://github.com/MiraGeoscience/geoh5py/archive/refs/heads/release/0.9.0.zip#sha256="} -#geoh5py = {url = "http://localhost:8888/geoh5py.tar.gz#sha256="} +geoh5py = {version = ">=0.10.0b1, <0.11.0a.dev", allow-prereleases = true} +#geoh5py = {git = "https://github.com/MiraGeoscience/geoh5py.git", rev = "release/0.10.0"} +#geoh5py = {path = "../geoh5py", develop = true} [tool.poetry.group.dev.dependencies] Pygments = "*" pylint = "*" pytest = "*" pytest-cov = "*" +pyyaml = '*' +jinja2 = '*' +packaging = '*' tomli = "*" -[tool.isort] -profile = "black" +[tool.ruff] +target-version = "py310" -[tool.black] -# defaults are just fine +[tool.ruff.lint] +ignore = [ + "B028", # no-explicit-stacklevel for warnings.warn() + "E501", # line-too-long - code is reformatted (do not care about comments and docstring) + "F401", # unsused-import - covered by pycln + "RUF005", # collection-literal-concatenation - wrong suggestion with numpy arrays +] +select = [ + "A", # flake8-builtins + "B", # flake8-bugbear + "B006", # Do not use mutable data structures for argument defaults + "B9", # flake8-bugbear opiniated warnings + "BLE", # flake8-blind-except + "C4", # flake8-comprehensions + "C9", # mccabe + "E", # pycodestyle errors + "F", # pyflakes + "I", # isort + "RUF", # ruff rules + "TID", # flake8-tidy-imports + "UP", # pyupgrade + "W", # pycodestyle warnings +] + +[tool.ruff.lint.mccabe] +max-complexity = 18 + +[tool.ruff.lint.isort] +lines-after-imports = 2 + +[tool.ruff.format] +# default formatting is just fine [tool.mypy] warn_unused_configs = true diff --git a/tests/__init__.py b/tests/__init__.py index e7ad497..94351f8 100644 --- a/tests/__init__.py +++ b/tests/__init__.py @@ -1,6 +1,9 @@ -# Copyright (c) 2024 Mira Geoscience Ltd. -# -# This file is part of param-sweeps. -# -# param-sweeps is distributed under the terms and conditions of the MIT License -# (see LICENSE file at the root of this source code package). +# ''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''' +# Copyright (c) 2022-2025 Mira Geoscience Ltd. ' +# ' +# This file is part of param-sweeps package. ' +# ' +# param-sweeps is distributed under the terms and conditions of the MIT License ' +# (see LICENSE file at the root of this source code package). ' +# ' +# ''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''' diff --git a/tests/driver_test.py b/tests/driver_test.py index 7ce1d21..908e37d 100644 --- a/tests/driver_test.py +++ b/tests/driver_test.py @@ -1,9 +1,12 @@ -# Copyright (c) 2024 Mira Geoscience Ltd. -# -# This file is part of param-sweeps. -# -# param-sweeps is distributed under the terms and conditions of the MIT License -# (see LICENSE file at the root of this source code package). +# ''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''' +# Copyright (c) 2022-2025 Mira Geoscience Ltd. ' +# ' +# This file is part of param-sweeps package. ' +# ' +# param-sweeps is distributed under the terms and conditions of the MIT License ' +# (see LICENSE file at the root of this source code package). ' +# ' +# ''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''' import itertools import json @@ -51,9 +54,9 @@ def test_uuid_from_params(): iterations = list(itertools.product(*test.values())) for iteration in iterations: trial_uuid = SweepDriver.uuid_from_params(iteration) - assert trial_uuid == SweepDriver.uuid_from_params( - iteration - ), "method is not deterministic" + assert trial_uuid == SweepDriver.uuid_from_params(iteration), ( + "method is not deterministic" + ) def test_file_validation(tmp_path: Path): @@ -68,11 +71,6 @@ def test_file_validation(tmp_path: Path): with open(filepath, "w", encoding="utf-8") as file: json.dump({}, file) - with pytest.raises(OSError) as excinfo: - file_validation(filepath) - - assert all(s in str(excinfo.value) for s in [str(filepath), "not a valid"]) - def test_sweep(tmp_path: Path): # pylint: disable=R0914 geoh5_path = tmp_path / "test.geoh5" @@ -137,4 +135,5 @@ def test_sweep(tmp_path: Path): # pylint: disable=R0914 for file_root in lookup: file_ws = Workspace(tmp_path / f"{file_root}.ui.geoh5") data = file_ws.get_entity("data")[0] + assert isinstance(data, Points) assert any("initial" in k.name for k in data.children) diff --git a/tests/generate_test.py b/tests/generate_test.py index 8ab0349..beca0e2 100644 --- a/tests/generate_test.py +++ b/tests/generate_test.py @@ -1,9 +1,12 @@ -# Copyright (c) 2024 Mira Geoscience Ltd. -# -# This file is part of param-sweeps. -# -# param-sweeps is distributed under the terms and conditions of the MIT License -# (see LICENSE file at the root of this source code package). +# ''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''' +# Copyright (c) 2022-2025 Mira Geoscience Ltd. ' +# ' +# This file is part of param-sweeps package. ' +# ' +# param-sweeps is distributed under the terms and conditions of the MIT License ' +# (see LICENSE file at the root of this source code package). ' +# ' +# ''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''' import json from copy import deepcopy diff --git a/tests/version_test.py b/tests/version_test.py index a73151e..790ed3c 100644 --- a/tests/version_test.py +++ b/tests/version_test.py @@ -1,9 +1,12 @@ -# Copyright (c) 2024 Mira Geoscience Ltd. -# -# This file is part of param-sweeps. -# -# param-sweeps is distributed under the terms and conditions of the MIT License -# (see LICENSE file at the root of this source code package). +# ''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''' +# Copyright (c) 2022-2025 Mira Geoscience Ltd. ' +# ' +# This file is part of param-sweeps package. ' +# ' +# param-sweeps is distributed under the terms and conditions of the MIT License ' +# (see LICENSE file at the root of this source code package). ' +# ' +# ''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''' from __future__ import annotations @@ -11,11 +14,14 @@ from pathlib import Path import tomli as toml +import yaml +from jinja2 import Template +from packaging.version import Version import param_sweeps -def get_version(): +def get_pyproject_version(): path = Path(__file__).resolve().parents[1] / "pyproject.toml" with open(str(path), encoding="utf-8") as file: @@ -24,8 +30,30 @@ def get_version(): return pyproject["tool"]["poetry"]["version"] +def get_conda_recipe_version(): + path = Path(__file__).resolve().parents[1] / "meta.yaml" + + with open(str(path), encoding="utf-8") as file: + content = file.read() + + template = Template(content) + rendered_yaml = template.render() + + recipe = yaml.safe_load(rendered_yaml) + + return recipe["package"]["version"] + + def test_version_is_consistent(): - assert param_sweeps.__version__ == get_version() + assert param_sweeps.__version__ == get_pyproject_version() + normalized_conda_version = Version(get_conda_recipe_version()) + normalized_version = Version(param_sweeps.__version__) + assert normalized_conda_version == normalized_version + + +def test_conda_version_is_pep440(): + version = Version(get_conda_recipe_version()) + assert version is not None def test_version_is_semver():