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mevislab.github.io/content/tutorials/image_processing/image_processing6.md

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@@ -26,7 +26,7 @@ This tutorial explains how to load and visualize DICOM RT (Radiotherapy) data in
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They include:
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* **RT Structure Set**, containing information related to patient anatomy, for example structures, markers, and isocenters. These entities are typically identified on devices such as CT scanners, physical or virtual simulation workstations, or treatment planning systems.
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* **RT Plan**, containing geometric and dosimetric data specifying a course of external beam and/or brachytherapy treatment, for example beam angles, collimator openings, beam modifiers, and brachytherapy channel and source specifications. The RT Plan entity may be created by a simulation workstation, and subsequently enriched by a treatment planning system before being passed on to a record and verify system or treatment device. An instance of the RT Plan object usually references a RT Structure Set instance to define a coordinate system and set of patient structures.
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* **RT Plan**, containing geometric and dosimetric data specifying a course of external beam and/or brachytherapy treatment, for example beam angles, collimator openings, beam modifiers, and brachytherapy channel and source specifications. The RT Plan entity may be created by a simulation workstation, and subsequently enriched by a treatment planning system before being passed on to a record and verify system or treatment device. An instance of the RT Plan object usually references an RT Structure Set instance to define a coordinate system and set of patient structures.
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* **RT Dose**, containing dose data generated by a treatment planning system in one or more of several formats: three-dimensional dose data, isodose curves, DVHs, or dose points.
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Additional objects not used in this tutorial are:
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![CSOLabelRenderer](/images/tutorials/image_processing/Example6_5.png " CSOLabelRenderer")
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By default, the ID of the contours is rendered. Open the panel of the `CSOLabelRenderer` and change the *labelString* parmeter as seen below.
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By default, the ID of the contours is rendered. Open the panel of the `CSOLabelRenderer` and change the *labelString* parameter as seen below.
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![CSOLabelRenderer labelString](/images/tutorials/image_processing/Example6_6.png "CSOLabelRenderer labelString")
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![Lookup table](/images/tutorials/image_processing/Example6_11.png "Lookup table")
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The lookup table shall be used for showing the RT Dose data as a semt-transparent overlay on the CT image. Add a `SoView2DOverlay` and a `SoGroup` module to your network. Replace the input of the View2D module from the `SoView2DCSOExtensibleEditor` with the `SoGroup`.
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The lookup table shall be used for showing the RT Dose data as a semi-transparent overlay on the CT image. Add a `SoView2DOverlay` and a `SoGroup` module to your network. Replace the input of the View2D module from the `SoView2DCSOExtensibleEditor` with the `SoGroup`.
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![RT Dose data using SoView2DOverlay](/images/tutorials/image_processing/Example6_12.png "RT Dose data using SoView2DOverlay")
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![RT Dose and RT Struct](/images/tutorials/image_processing/Example6_13.png "RT Dose and RT Struct")
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## Summary
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* DICOM RT datacan be loaded and processed in MeVisLab.
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* DICOM RT data can be loaded and processed in MeVisLab.
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* RT Structure Sets can be converted to MeVisLab contours and visualized using `ExtractRTStruct` and `CSOLabelRenderer` modules
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* Anatomical information can be shown using the module `CSOLabelRenderer`.
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* RT Dose files can be shown as a semi-transparent colored overlay using `SoView2DOverlay`.

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