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+  requires_python: '>=3.9'
 - conda: https://conda.anaconda.org/conda-forge/noarch/typing-extensions-4.15.0-h396c80c_0.conda
   sha256: 7c2df5721c742c2a47b2c8f960e718c930031663ac1174da67c1ed5999f7938c
   md5: edd329d7d3a4ab45dcf905899a7a6115
@@ -6510,6 +6484,11 @@ packages:
   - pkg:pypi/typing-utils?source=hash-mapping
   size: 15183
   timestamp: 1733331395943
+- pypi: https://files.pythonhosted.org/packages/c7/b0/003792df09decd6849a5e39c28b513c06e84436a54440380862b5aeff25d/tzdata-2025.3-py2.py3-none-any.whl
+  name: tzdata
+  version: '2025.3'
+  sha256: 06a47e5700f3081aab02b2e513160914ff0694bce9947d6b76ebd6bf57cfc5d1
+  requires_python: '>=2'
 - conda: https://conda.anaconda.org/conda-forge/noarch/tzdata-2025c-h8577fbf_0.conda
   sha256: 50fad5db6734d1bb73df1cf5db73215e326413d4b2137933f70708aa1840e25b
   md5: 338201218b54cadff2e774ac27733990
@@ -6560,6 +6539,17 @@ packages:
   - pkg:pypi/uri-template?source=hash-mapping
   size: 23990
   timestamp: 1733323714454
+- pypi: https://files.pythonhosted.org/packages/6d/b9/4095b668ea3678bf6a0af005527f39de12fb026516fb3df17495a733b7f8/urllib3-2.6.2-py3-none-any.whl
+  name: urllib3
+  version: 2.6.2
+  sha256: ec21cddfe7724fc7cb4ba4bea7aa8e2ef36f607a4bab81aa6ce42a13dc3f03dd
+  requires_dist:
+  - brotli>=1.2.0 ; platform_python_implementation == 'CPython' and extra == 'brotli'
+  - brotlicffi>=1.2.0.0 ; platform_python_implementation != 'CPython' and extra == 'brotli'
+  - h2>=4,<5 ; extra == 'h2'
+  - pysocks>=1.5.6,!=1.5.7,<2.0 ; extra == 'socks'
+  - backports-zstd>=1.0.0 ; python_full_version < '3.14' and extra == 'zstd'
+  requires_python: '>=3.9'
 - conda: https://conda.anaconda.org/conda-forge/noarch/urllib3-2.6.2-pyhd8ed1ab_0.conda
   sha256: f4302a80ee9b76279ad061df05003abc2a29cc89751ffab2fd2919b43455dac0
   md5: 4949ca7b83065cfe94ebe320aece8c72
diff --git a/pyproject.toml b/pyproject.toml
index 154252c..ad98090 100644
--- a/pyproject.toml
+++ b/pyproject.toml
@@ -81,7 +81,11 @@ dependencies = [
     "python-dotenv",
     "typer",
     "jax",
-    "sh ==2.1",
+    "sh",
+    "loguru",
+    "ruamel-yaml",
+    "cookiecutter",
+    "pyyaml",
 ]
 readme = "README.md"
 
@@ -107,13 +111,7 @@ pyml-cli = { path = ".", editable = true }
 
 # NOTE: Core dependencies (needed for running the program) go here.
 [tool.pixi.dependencies]
-typer = ">=0.21.0,<0.22"
-loguru = ">=0.7.3,<0.8"
-cookiecutter = ">=2.6.0,<3"
-sh = "==2.1"
 marimo = ">=0.18.4,<0.19"
-"ruamel.yaml" = ">=0.18.17,<0.19"
-yaml = ">=0.2.5,<0.3"
 
 # NOTE: Testing dependencies (not needed for running program) go here.
 [tool.pixi.feature.tests.dependencies]