pyproject.toml

[project]
name = "research-project"
version = "0.1.0"
description = "A Python research project template"
readme = "README.md"
requires-python = ">=3.11"
dependencies = [
    "numpy>=1.24.0",
    "pandas>=2.0.0",
    "hydra-core>=1.3.0",
    "wandb>=0.15.0",
]

[project.optional-dependencies]
dev = [
    "pytest>=7.4.0",
    "pytest-cov>=4.1.0",
    "mypy>=1.5.0",
    "black>=23.7.0",
    "isort>=5.12.0",
    "pylint>=2.17.0",
    "flake8>=6.1.0",
    "pydocstyle>=6.3.0",
    "pre-commit>=3.3.0",
]

[build-system]
requires = ["hatchling"]
build-backend = "hatchling.build"

[tool.hatch.build.targets.wheel]
packages = ["src"]

[tool.black]
line-length = 79
target-version = ['py311']
include = '\.pyi?$'
extend-exclude = '''
/(
  # directories
  \.eggs
  | \.git
  | \.hg
  | \.mypy_cache
  | \.tox
  | \.venv
  | build
  | dist
)/
'''

[tool.isort]
profile = "black"
line_length = 79
multi_line_output = 3
include_trailing_comma = true
force_grid_wrap = 0
use_parentheses = true
ensure_newline_before_comments = true
src_paths = ["src", "experiments", "tests"]

[tool.pytest.ini_options]
testpaths = ["tests"]
python_files = ["test_*.py"]
python_classes = ["Test*"]
python_functions = ["test_*"]
addopts = [
    "--verbose",
    "--cov=src",
    "--cov-report=term-missing",
    "--cov-report=html",
]

[tool.mypy]
python_version = "3.11"
warn_return_any = true
warn_unused_configs = true
disallow_untyped_defs = true
ignore_missing_imports = true
files = ["src", "experiments"]

[tool.coverage.run]
source = ["src"]
omit = ["tests/*", "experiments/*"]

[tool.coverage.report]
exclude_lines = [
    "pragma: no cover",
    "def __repr__",
    "raise AssertionError",
    "raise NotImplementedError",
    "if __name__ == .__main__.:",
]