From 29f06188443202badd898f66abd193f1e95120d3 Mon Sep 17 00:00:00 2001 From: Irfan Alibay Date: Sun, 31 May 2026 23:51:18 +0100 Subject: [PATCH 1/4] Lowercase mdanalysis and mdanalysistests for conda installs --- action.yaml | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/action.yaml b/action.yaml index 1a2eb11..3f71ea3 100644 --- a/action.yaml +++ b/action.yaml @@ -80,9 +80,9 @@ runs: _PACKAGE_SUFFIX="==${{ inputs.version }}" fi - _INSTALL_LINE="MDAnalysis${_PACKAGE_SUFFIX}" + _INSTALL_LINE="mdanalysis${_PACKAGE_SUFFIX}" if [[ "${{ inputs.install-tests }}" == "true" ]] ; then - _INSTALL_LINE="${_INSTALL_LINE} MDAnalysisTests${_PACKAGE_SUFFIX}" + _INSTALL_LINE="${_INSTALL_LINE} mdanalysistests${_PACKAGE_SUFFIX}" fi # special case develop From a3d5ef0093f30e262422bca3e0bb61e2d4ab81eb Mon Sep 17 00:00:00 2001 From: IAlibay Date: Mon, 1 Jun 2026 00:08:06 +0100 Subject: [PATCH 2/4] completely remove the environment-file argument --- .github/workflows/gh-ci.yaml | 1 - 1 file changed, 1 deletion(-) diff --git a/.github/workflows/gh-ci.yaml b/.github/workflows/gh-ci.yaml index c59ff49..1ed0d87 100644 --- a/.github/workflows/gh-ci.yaml +++ b/.github/workflows/gh-ci.yaml @@ -102,7 +102,6 @@ jobs: if: ${{ matrix.installer == 'micromamba' }} uses: mamba-org/setup-micromamba@v3 with: - environment-file: false environment-name: mda create-args: | python==${{ matrix.python-version }} From 8ecef773f55f42a2284f6d3d17af7f24a0629f69 Mon Sep 17 00:00:00 2001 From: IAlibay Date: Mon, 1 Jun 2026 00:10:56 +0100 Subject: [PATCH 3/4] try this to fix CI --- .github/workflows/gh-ci.yaml | 10 ++++------ 1 file changed, 4 insertions(+), 6 deletions(-) diff --git a/.github/workflows/gh-ci.yaml b/.github/workflows/gh-ci.yaml index 1ed0d87..febdd9c 100644 --- a/.github/workflows/gh-ci.yaml +++ b/.github/workflows/gh-ci.yaml @@ -104,7 +104,7 @@ jobs: with: environment-name: mda create-args: | - python==${{ matrix.python-version }} + python=${{ matrix.python-version }} pip - name: Install conda Python ${{ matrix.python-version }} @@ -163,14 +163,12 @@ jobs: - uses: actions/checkout@v6 - name: Install mamba Python ${{ needs.gen-python-matrix.outputs.stable-python }} - uses: mamba-org/provision-with-micromamba@main + uses: mamba-org/setup-micromamba@v3 with: - environment-file: ./.github/test-environment.yaml environment-name: mda - extra-specs: | - python==${{ needs.gen-python-matrix.outputs.stable-python }} + create-args: | + python=${{ needs.gen-python-matrix.outputs.stable-python }} pip - channels: conda-forge - name: Install uses: ./ From eb1bed6065c1d869f18b7bb7ebc316d5ea3208f3 Mon Sep 17 00:00:00 2001 From: IAlibay Date: Mon, 1 Jun 2026 00:13:22 +0100 Subject: [PATCH 4/4] fix create-args argument --- .github/workflows/gh-ci.yaml | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/.github/workflows/gh-ci.yaml b/.github/workflows/gh-ci.yaml index febdd9c..29f3d07 100644 --- a/.github/workflows/gh-ci.yaml +++ b/.github/workflows/gh-ci.yaml @@ -103,7 +103,7 @@ jobs: uses: mamba-org/setup-micromamba@v3 with: environment-name: mda - create-args: | + create-args: >- python=${{ matrix.python-version }} pip @@ -166,7 +166,7 @@ jobs: uses: mamba-org/setup-micromamba@v3 with: environment-name: mda - create-args: | + create-args: >- python=${{ needs.gen-python-matrix.outputs.stable-python }} pip